| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0509 |
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| Symbol | tppB |
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| ID | 5137895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 543050 |
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| End bp | 544594 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531967 |
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| Product | putative tripeptide transporter permease |
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| Protein accession | YP_001216460 |
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| Protein GI | 147675039 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGTTG GAGCTTCACA ACAGACTTCA ACCATTGCAC TGCACAATGA TACAGGAATG
CTTATGTCCA ACCTTAATAT CTTTAAACAA CCGAATGCCT TCTATTTGAT CTTCTCTATC
GAATTTTGGG AACGATTTGG CTTCTACGGT ATGCAAGCCA TTCTGACGGT TTACATGGTC
AAAATTATGG GCATGGATGA GTCCGCTTCT TTCGTACTCT TCGGTGCCTT TTCAGCGTTA
GTGTACGGCT TTGTCGCGAT TGGCGGTTGG ATCGGCGATA AAGTCATTGG AACAAAACGT
GCTATTACTC TCGGCGCGAT TGTCATGATG CTTGGTTATG TTCTGCTTGG ACTCTCCACC
GCAGATCATC CGCTGGTTGG GCCAACGTTA ATCTACATCG CTATGGGCTT TATTACGGTT
GGTAACGGCT TGTTCAAAGC AAACCCTTCG AGTCTACTTG CAAAAATTTA CCCAGAGAAT
GATCCTCGCT TAGATGGTGC TTTCACCATG TACTACATGG CGATCAATTT AGGCTCTTTC
TTCTCAATGA TCATTACTCC ACTTGTAGCA ATCAAGATGG GCTATGGAAT GGCATTTGGG
GTGAGTGCAG TCGGCCTTGC CATCACTGTG GTGAACTTCC TATTTTGCTT ACGCATGTTA
AAAGGCACAG GCTCTCCAGC CGATCTTATG CCGGTGAATA AAATGTATCT GGTTCTTGTC
GCCGTGGGTT CTATCATTGC CAGCCTAGTG TGTAGCTACT TACTACAAAA CCTCACCCTA
GCACACGGTA TTTTGGTTGT TGCGGGTCTG TTTATTCTGG GATGTTATTT TAAAGAAGCG
TTCTCTATGT CTGGCATTGA ACGCGCCAAA ATGCTGGTTG CCTTCATCTT GATGCTGCAA
GGTGTAGTGT TTTTCGTACT CTATTTCCAA ATGCCAACTT CACTGAATTT CTTTGCTATC
AATAACGTTG AGCACCATAT CTTTGGTTTT GATGTCGCGC CAGAGCAGTT TCAAGCGCTC
AACCCGTTTT GGATTATGAT TGCTAGCCCT ATTTTGGCGG CGACTTACGG CAAACTGGGA
GATAAATTGG CGATGCCTTT CAAGTTCGCT TTCGGGATGG CTTTATGTGC GCTCTCTTTC
TTAGTATTAA GCTGGGGAAC CTTGTTTGCT AACGAACAAG GCATCATTAG CTCAAACTGG
CTTATCGCAA GTTATGCTTT CCAATCCATC GGTGAACTCC TAGTCTCTGG TCTTGGTTTA
GCGATGGTCG CGCAATTGGT ACCACAACGT ATGATGGGTT TTGCAATGGG TATGTGGTTC
CTCACTTCGG CCTCTGCCGC GGTCATTGCA GGTTGGGTCG CTAGCCTGAC TTCAACGCCG
GCTAATGTGT CTGGCGCCAC CGAATCACTG CATATTTATG GTGAGGTATT TGCGCAAATT
GGTTATGTGA CAGCCGGAAT TGCCATCGTC ACCTTCATGA TTGCACCTAA GCTGACTCGC
ATCTGCCGCG GTGAATCAGA GCCGTTAGAG CTGGTGACGC AATAA
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| Protein sequence | MTVGASQQTS TIALHNDTGM LMSNLNIFKQ PNAFYLIFSI EFWERFGFYG MQAILTVYMV
KIMGMDESAS FVLFGAFSAL VYGFVAIGGW IGDKVIGTKR AITLGAIVMM LGYVLLGLST
ADHPLVGPTL IYIAMGFITV GNGLFKANPS SLLAKIYPEN DPRLDGAFTM YYMAINLGSF
FSMIITPLVA IKMGYGMAFG VSAVGLAITV VNFLFCLRML KGTGSPADLM PVNKMYLVLV
AVGSIIASLV CSYLLQNLTL AHGILVVAGL FILGCYFKEA FSMSGIERAK MLVAFILMLQ
GVVFFVLYFQ MPTSLNFFAI NNVEHHIFGF DVAPEQFQAL NPFWIMIASP ILAATYGKLG
DKLAMPFKFA FGMALCALSF LVLSWGTLFA NEQGIISSNW LIASYAFQSI GELLVSGLGL
AMVAQLVPQR MMGFAMGMWF LTSASAAVIA GWVASLTSTP ANVSGATESL HIYGEVFAQI
GYVTAGIAIV TFMIAPKLTR ICRGESEPLE LVTQ
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