Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0502 |
Symbol | |
ID | 5136277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 536350 |
End bp | 536919 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531960 |
Product | phosphodiesterase |
Protein accession | YP_001216453 |
Protein GI | 147674558 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTTTTA AGAGGTTAAC CATGAAACTA TTTTTTGTCT CAGATCTGCA TGGTTCTTTA TCTGCGACCG AACAAGCACT TGCGCTTTAT CAAGCATCGG GGGCGCAATC TCTGATTTTG TTGGGCGATG TATTAAATCA CGGGCCACGT AATCCTATCC CGCAAGGGTA CAACCCTGTA GCCGTCGCTG AAAAATTGAA TCAGTTTGCT CAGCAGATCA TTGCTGTGCG TGGGAACTGT GATAGTGAAG TCGATCAGAT GCTGTTGAGT TTTCCTATGA TGAGTGACTC AGCATGGGTA CTGTTAAGTT CAGGGCGACG CTTACTTTTA ACGCATGGGC ATCTTTACCA TAAAGATAAG CTGCCGCCGC TTAGCGATGG GGATGTTTTG GTGCATGGCC ACACGCACAT TCCTGTGGCC GAACAAGTTG GCTCAATATA CCTAGTTAAC CCGGGTTCTA TGACGTTTCC CCGCGGTGAG TATGCCGCGA GCTATGGCGT GCTGGAAGGC GATACAATGA AGGTGATATC GGTTGCTGGC GAAACGCTGG CCAGTTGCCT CCTTCAATAA
|
Protein sequence | MFFKRLTMKL FFVSDLHGSL SATEQALALY QASGAQSLIL LGDVLNHGPR NPIPQGYNPV AVAEKLNQFA QQIIAVRGNC DSEVDQMLLS FPMMSDSAWV LLSSGRRLLL THGHLYHKDK LPPLSDGDVL VHGHTHIPVA EQVGSIYLVN PGSMTFPRGE YAASYGVLEG DTMKVISVAG ETLASCLLQ
|
| |