Gene VC0395_A0486 details

Gene Information

• Locus tag: VC0395_A0486
• Symbol: crr
• ID: 5136645
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 519866
• End bp: 520375
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640531944
• Product: PTS system glucose-specific transporter subunit
• Protein accession: YP_001216437
• Protein GI: 147673335
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2190] Phosphotransferase system IIA components
• TIGRFAM ID: [TIGR00830] PTS system, glucose subfamily, IIA component

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000000175128
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCTGT TTGACAAACT TAAGAAGCTA GTCTCTGACG ACAGCGCTAA CGCAGGTGCA 
ATCGACATCA TCGCACCTCT TTCTGGTGAA ATTGTAAACA TCGAAGATGT ACCAGATGTG 
GTTTTCGCTG AGAAAATCGT TGGCGACGGT ATCGCGATCA AGCCTGCTGG TAACAAAATG 
GTAGCTCCTG TTAACGGTAC TATCGGCAAA ATCTTCGAAA CCAACCACGC GTTTTCTATC 
GAATCAGATG AAGGCGTTGA GCTGTTTGTT CACTTCGGTA TCGACACGGT TGAGCTGAAA 
GGTGAAGGCT TCAAGCGTAT TGCAGAAGAA GGCCAATCAG TGAAAATCGG CGATACTATC 
ATCGAATTCG ATTTGGCACT GCTCGAAGAG AAAGCGAAAT CAACTCTGAC TCCTGTTGTT 
ATCTCTAACA TGGATGAAAT CAAAGAGCTG AACAAACTTT CTGGTTCAGT GACCGTAGGT 
GAAACACCGA TCCTACGCGT GACCAAGTAA 

 

Protein sequence

MGLFDKLKKL VSDDSANAGA IDIIAPLSGE IVNIEDVPDV VFAEKIVGDG IAIKPAGNKM 
VAPVNGTIGK IFETNHAFSI ESDEGVELFV HFGIDTVELK GEGFKRIAEE GQSVKIGDTI 
IEFDLALLEE KAKSTLTPVV ISNMDEIKEL NKLSGSVTVG ETPILRVTK