Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0484 |
Symbol | |
ID | 5135437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 516900 |
End bp | 518324 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640531942 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001216435 |
Protein GI | 147675479 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000105841 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGA AACTGCTAAT TAAAACTTGG GGCTGCCAGA TGAACGAGTA CGATTCATCG AAAATGGCTG ACCTGCTTAA TGCTGCAAAC GGCTATGAGC TGACAGAGAT ACCCGAGGAA GCTGACGTTT TACTCCTAAA CACCTGTTCG ATTCGTGAAA AGGCGCAGGA AAAAGTCTTC CACCAACTCG GCCGTTGGAA AACCCTGAAA GACAAAAAAC CCGGAGTCGT GATCGGTGTT GGTGGCTGTG TTGCCACTCA AGAAGGTGAC TCGATTCGCG ATCGTGCACC TTATGTGGAT GTCATCTTCG GCCCACAGAC ACTTCATCGT CTGCCTGAAA TGATTAAACA ATCGCAAACC AGCGACGCGC CCGTGATGGA TATCTCTTTC CCTGAGATTG AAAAATTCGA CCGCCTGCCT GAGCCACGTG CGGAAGGCCC AACTGCGTTC GTTTCTATCA TGGAAGGCTG CTCAAAATAC TGTACTTACT GCGTAGTGCC TTACACTCGT GGTGAAGAAG TCAGCCGTCC TATGGACGAT GTCCTGTTCG AGATCGCTCA GCTTGCCGAG CAAGGGGTGC GTGAAGTTAA CCTGCTGGGT CAAAACGTCA ACGCTTACCG TGGTGCCACT CACGATGGCG GCATTTGCTC TTTCGCTGAA TTACTGCGTT TGGTCGCCAC CATTGACGGC ATCGATCGTA TCCGCTTTAC CACTAGCCAC CCACTCGAAT TTACGGATGA CATTATTGCA GTGTACGAAG ACACGCCTGA GCTCGTGAGC TTCCTGCACT TGCCAGTACA AAGTGGGAGC GATCGCATTC TGACTATGAT GAAGCGTCCA CATACGGCGA TTGAGTACAA ATCCATCATC CGTAAGCTAC GTAAAGCGCG CCCAGATATT CAAATCAGCT CTGATTTTAT CGTTGGCTTC CCTGGGGAAA CCGACAAAGA TTTCCAAGAC ACCATGAAGC TGATCCGCGA TGTCGATTTC GACATGAGCT TTAGCTTTAT TTTCTCACCT CGTCCAGGCA CACCCGCCGC TGACTATCCT TGCGATCTGT CGGAAGAAGT GAAGAAAGAA CGCCTGTACG AACTGCAGCA GCAGATCAAC AGCCAAGCTA TGCGTTATTC ACGCCTGATG CTGGGTACTG AACAGCGTAT TTTGGTTGAA GGTCCATCGA AAAAAGATCT GATGGAGCTG CGTGGCCGTA CTGAAAATAA CCGTGTAGTG AACTTCGAAG GCTCACCGGA TCTGATCGGT CAATTTGTTG ATGTGAAGAT CGTCGACGTT TTCCCGAACT CACTGCGCGG TGAACTGCTG CGTACCGAAC AAGAGATGAA TCTGCGTATC GCGACCTCTC CCTCTGAAAT GAAAGCGAAG ACTCGCCGCG AGGATGAGCT TGGGGTTGCT ACATTTACTC CTTAA
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Protein sequence | MSKKLLIKTW GCQMNEYDSS KMADLLNAAN GYELTEIPEE ADVLLLNTCS IREKAQEKVF HQLGRWKTLK DKKPGVVIGV GGCVATQEGD SIRDRAPYVD VIFGPQTLHR LPEMIKQSQT SDAPVMDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCSKY CTYCVVPYTR GEEVSRPMDD VLFEIAQLAE QGVREVNLLG QNVNAYRGAT HDGGICSFAE LLRLVATIDG IDRIRFTTSH PLEFTDDIIA VYEDTPELVS FLHLPVQSGS DRILTMMKRP HTAIEYKSII RKLRKARPDI QISSDFIVGF PGETDKDFQD TMKLIRDVDF DMSFSFIFSP RPGTPAADYP CDLSEEVKKE RLYELQQQIN SQAMRYSRLM LGTEQRILVE GPSKKDLMEL RGRTENNRVV NFEGSPDLIG QFVDVKIVDV FPNSLRGELL RTEQEMNLRI ATSPSEMKAK TRREDELGVA TFTP
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