| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0471 |
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| Symbol | |
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| ID | 5136305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 503017 |
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| End bp | 503808 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640531929 |
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| Product | putative rare lipoprotein A |
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| Protein accession | YP_001216422 |
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| Protein GI | 147673217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000420345 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGAA TTTATTTATA CTTACTGCTC GTTTTAATCC TCGCTGGATG TAGCTCTCCT
GGGGGGCGCT ATGATATGTC TGACGATCAA GCACCCGATA CACCACTGTC TGTCGAACAT
ATTGAAGATG CACATCCGCA ATATGAACCG TACAGCTTCG GGGGTAATAA AGATTACAAT
CTGCGTGGTA AGAGCTATCG CATCATTAAA AACCCTAAAG GGTTTACCGA AAGTGGCAAA
GCCTCTTGGT ACGGCAAAAA ATTCCATGGC CACCTCACCT CAAACGGTGA GATTTACGAC
ATGTACTCGA TGACGGCAGC GCATAAAACG CTACCGATTC CCAGTTATGT CAAAGTGACC
AATACGGACA ATGGCAAATC GACCGTGGTA AGAGTCAATG ACCGTGGGCC TTTCCATGAT
GGAAGAATCA TCGACCTTAG CTATGCAGCC GCCTATAAAA TTGGGGTGGT CCAAGCAGGA
ACCGCCAATG TGCGCATTGA AGTGATTACC GTCGATAAAC CCACTAAACC GCGCCCGAAA
AGTAAAAACA ACGCCCTCGA ATATGTGATT CAGGTGGTTT CATCACAACA TATCGAACGC
GTGCGAACTT TAGCGCAAAA CCTCGGTCAG AACTTATCGG CACCGAGCTT CGTCGAGAGT
ACAAATAATA CGCATCGCTT ATTCCTCGGG CCATTTACTG ACGATGACCT GACGCAGACT
TTACTTGAAC AAGTAAAATC CGCAGGCTAT GACAGCGCAT TTATCAAGAC GATTAATAAA
CGTGCTAAAT GA
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| Protein sequence | MNRIYLYLLL VLILAGCSSP GGRYDMSDDQ APDTPLSVEH IEDAHPQYEP YSFGGNKDYN
LRGKSYRIIK NPKGFTESGK ASWYGKKFHG HLTSNGEIYD MYSMTAAHKT LPIPSYVKVT
NTDNGKSTVV RVNDRGPFHD GRIIDLSYAA AYKIGVVQAG TANVRIEVIT VDKPTKPRPK
SKNNALEYVI QVVSSQHIER VRTLAQNLGQ NLSAPSFVES TNNTHRLFLG PFTDDDLTQT
LLEQVKSAGY DSAFIKTINK RAK
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