| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0467 |
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| Symbol | lipA |
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| ID | 5137227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 499528 |
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| End bp | 500493 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531925 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001216418 |
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| Protein GI | 147673404 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00091244 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC CAATTCAGAT GGAACGCGGC GTTAAATATC GTGACGCCGA CAAAATGGCT
TTGATTCCCA TCAAGAACAT GCCGACAGAG CAGAAAGAAG TTCTGCGCAA ACCAGAATGG
ATGAAGATAA AGCTACCTGC GGATAGCCAG CGCATTCAAG ACATCAAGGC CGCCATGCGT
AAAAATAATC TTCACTCAGT CTGTGAAGAA GCCTCCTGCC CTAACTTGGC TGAGTGTTTT
AACCATGGTA CGGCGACCTT TATGATTTTA GGTGCTATCT GTACCCGTCG CTGCCCATTC
TGTGACGTTG CCCATGGCCG CCCCAATGCA CCAGAAGCGG AAGAGCCGAA AAAGCTTGCG
CAAACCATTC ACGATATGAA GCTCAAGTAC GTGGTAATTA CTTCGGTGGA CCGCGATGAC
TTGCGTGATG GTGGTGCACA ACATTTCGCC GATTGTAACC GTGAAATTCG CGCTTTGAAT
CCGCACATCA AGATTGAAAC CTTAGTGCCT GATTTCCGTG GTCGTATGGA AGTGGCTCTT
GAGGCCTTAA AAGACAATCC ACCCGATGTG TTCAACCACA ATTTGGAAAC CGCACCACGC
TTGTATCGTA AAGTGCGCCC AGGCGCTAAC TATAAGTGGT CGTTAGAACT ACTGCGTCAA
TTTAAAGAGC AACATCCTCA TGTACCGACT AAATCCGGTT TGATGATGGG TTTGGGTGAA
ACTAAAGAAG AGATCGTCGA AGTATTGAAA GATCTCCGTG CTCATGGCGT CACCATGCTG
ACTCTTGGCC AATATCTCGC ACCAAGTCGC CACCATCTGC CGGTTGAACG CTACGTGCCA
CCCGCAGAGT TTGATGAGCT GAAAGAGATT GCTCTAGAAC TCGGCTTTAC TCATGCAGCC
TGTGGACCCT TTGTACGTTC CTCTTACCAT GCTGACTTAC AAGCCAAGGG TTTAGAAGTC
AAATAA
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| Protein sequence | MSKPIQMERG VKYRDADKMA LIPIKNMPTE QKEVLRKPEW MKIKLPADSQ RIQDIKAAMR
KNNLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPNA PEAEEPKKLA
QTIHDMKLKY VVITSVDRDD LRDGGAQHFA DCNREIRALN PHIKIETLVP DFRGRMEVAL
EALKDNPPDV FNHNLETAPR LYRKVRPGAN YKWSLELLRQ FKEQHPHVPT KSGLMMGLGE
TKEEIVEVLK DLRAHGVTML TLGQYLAPSR HHLPVERYVP PAEFDELKEI ALELGFTHAA
CGPFVRSSYH ADLQAKGLEV K
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