| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0438 |
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| Symbol | |
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| ID | 5135859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 464791 |
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| End bp | 465849 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531896 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216389 |
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| Protein GI | 147674519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000466929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA ACACTGTACT TTCATTGACC TTACTGACCC TGCTAATGAA CAGCGCTGTG
CTATCGGCCA AAGAGCCGAA CCAGCCGCCC GCGATTTCTG TTGTGACAGA GTCGGTTCAA
TCTCAGCAAA TTTCTCAATC TCTTTCTGTT GTGGGTAAGC TTAAAGCCGA GCAATCGGTC
GACATTGCCG CTGAAGTGGC GGGTAAAGTG GACATGATTG CGGTGCAAGC CAATCAGCAA
GTTAAAAAAG GTCAGATTCT GATCAAATTG GATGATGACA AAGCTCAAGC GGCCTTGGTG
GAAGCTAAAG CTTATTTACA AGATGAGCAG CGTAAACTGA CGGAATACGA GCGCTTGCTA
AAACGTAATG CGATTACGCC CACGGAAATT GATGCACAGC GCGCCCGAGT GGAGATTGGT
CAAGCGAGAT TGAATGCCGC TCAGGCCAAT TTGGCCGATT TACACATTAC TGCTCCTTTT
GATGGCACGG TTGGGTTTAT CGATTTTAGC CGCGGTAAGT GGGTGAGTGC GGGCTCTGAA
TTACTGACGC TGGATAATCT TTCCTTGATG CGGCTCGACC TGCAAATTCC AGAACGTTAT
CTGCCACAGT TAAGCAAGGG CATGAAGGTG CAAGGCAGTA GCGAAGCGTG GCCAAACGTG
CAGTTTGAAG GTTCGGTGGT GGCTGTGGAT TCGCGTATCA ATCAAGAAAC CTTAAATTTA
CGAGTGCGCG TGCATTTCCC CAATCCAGAT CAGCGCCTCA AGCCGGGCAT GTTGATGTCG
GCACGCATCC ATTTCCCCGC TATTAGTGCG CCGATTATTC CTGTGCAGGC CCTTGAGTAC
TCCGGCACCA AACGTTTTGT TTACGTGATT GGTGAAGACA ATGTAGCCAA ACGACGTGAA
GTGAGCCTGG GCGCTCGGGT TGAAAATCAG GTCGTGATTG AGAAAGGCTT ACAGATTGGC
GAGAAAATTG TCGTTCAAGG CATAGTCAAT ATGCGTGACA ACGCGCGTGT TAGCGAAGTC
ACCGTAGAAG GGCGTCCGCT GAAGAAGGAT GACAAATAA
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| Protein sequence | MNKNTVLSLT LLTLLMNSAV LSAKEPNQPP AISVVTESVQ SQQISQSLSV VGKLKAEQSV
DIAAEVAGKV DMIAVQANQQ VKKGQILIKL DDDKAQAALV EAKAYLQDEQ RKLTEYERLL
KRNAITPTEI DAQRARVEIG QARLNAAQAN LADLHITAPF DGTVGFIDFS RGKWVSAGSE
LLTLDNLSLM RLDLQIPERY LPQLSKGMKV QGSSEAWPNV QFEGSVVAVD SRINQETLNL
RVRVHFPNPD QRLKPGMLMS ARIHFPAISA PIIPVQALEY SGTKRFVYVI GEDNVAKRRE
VSLGARVENQ VVIEKGLQIG EKIVVQGIVN MRDNARVSEV TVEGRPLKKD DK
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