Gene VC0395_A0383 details

Gene Information

• Locus tag: VC0395_A0383
• Symbol: dnaJ
• ID: 5135638
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 413272
• End bp: 414417
• Gene Length: 1146 bp
• Protein Length: 381 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640531841
• Product: chaperone protein DnaJ
• Protein accession: YP_001216338
• Protein GI: 147674389
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain
• TIGRFAM ID: [TIGR02349] chaperone protein DnaJ

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAC GTGATTTTTA CGAAGTATTA GGCGTAGGCC GTGACGCCTC CGAGCGTGAT 
ATTAAAAAGG CATACAAACG CCTTGCGATG AAATACCACC CGGACCGCAA CTCGGGAGAT 
GCTGGTGCGG CGGAAAAGTT TAAAGAAGTC AAAGAAGCGT ATGAAATTCT GACCGATGCG 
CAGAAGAAAG CAGCTTATGA CCAATACGGC CATGCGGCAT TTGAGCAAGG CGCGGGTGGT 
TTTGGTGGCG GCGGCTTCGG CGGTGGCGGT GCTGATTTTG GCGATATTTT CGGTGACGTG 
TTTGGTGATA TTTTCGGTGG TGGTCGCCGT GGCGGCGGTC CAAGAGCACA GCGTGGCTCC 
GATCTACGTT ACAACATGGA ACTGAGCCTT GAAGAAGCGG TTCGCGGCTG CTCGAAAGAG 
ATTGAAGTAC CGACATTAGT ACACTGTGAC GCTTGCGATG GATCAGGTGC GAAAAAAGGC 
ACCTCAGCAC AAACTTGTGG AACCTGTCAC GGTCATGGCC AAGTCCAGAT GCGTCAGGGC 
TTCTTTGCGG TGCAGCAAAC CTGTCCAACT TGTCATGGTA AAGGCAAGAT CATCAAAGAT 
CCTTGTAACG TCTGTCATGG CCAAGGTCGC AAGCAAAAGA CCAAGACACT CAATGTGAAA 
ATTCCAGCGG GTGTGGATAC CGGCGATCGC ATTCGTCTTT CCGGTGAAGG AGAAGCGGGA 
GAAATGGGCG CGCCAGCAGG GGATTTGTAC GTACAAGTGC ATGTCAAAGA GCACCACATT 
TTCGAGCGTG ATGGCAATAA CTTGTACTGT GAAGTACCAG TGAGCTTCGC AATGGCGGCT 
CTGGGCGGTG AAGTAGAAGT ACCGACACTC GATGGTCGCG TGAGCTTGAA AGTGCCTGCG 
GAAACCCAAA CGGGTCGCAT GTTCCGCATG CGCGGTAAAG GTGTGAAAGG CGTTCGCTCT 
GCAGCACTGG GCGATCTGAT TGTCAAACTT GTGGTCGAAA CCCCAGTCAA TTTGAGTGCT 
CGTCAGAAAG AGCTGCTGAA AGAGTTTGAA GAGTCTTGTG GCGGCGAAGC GGCGACGAAA 
CACAAGCCGA AAGCCGAAGG CTTCTTTAAT GGTGTGAAGA AGTTTTTTGA TGACTTAACC 
AGTTAA 

 

Protein sequence

MSKRDFYEVL GVGRDASERD IKKAYKRLAM KYHPDRNSGD AGAAEKFKEV KEAYEILTDA 
QKKAAYDQYG HAAFEQGAGG FGGGGFGGGG ADFGDIFGDV FGDIFGGGRR GGGPRAQRGS 
DLRYNMELSL EEAVRGCSKE IEVPTLVHCD ACDGSGAKKG TSAQTCGTCH GHGQVQMRQG 
FFAVQQTCPT CHGKGKIIKD PCNVCHGQGR KQKTKTLNVK IPAGVDTGDR IRLSGEGEAG 
EMGAPAGDLY VQVHVKEHHI FERDGNNLYC EVPVSFAMAA LGGEVEVPTL DGRVSLKVPA 
ETQTGRMFRM RGKGVKGVRS AALGDLIVKL VVETPVNLSA RQKELLKEFE ESCGGEAATK 
HKPKAEGFFN GVKKFFDDLT S