Gene VC0395_A0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0315 
Symbol 
ID5135377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp335503 
End bp335832 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content50% 
IMG OID640531773 
Producthypothetical protein 
Protein accessionYP_001216271 
Protein GI147674137 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCATG CCCATGTTTA TTTTGACCCA GACCAAGCGA TTGTCGCGGA GCGCTTTCGC 
CAACAAATTG CCCGTGAACG CCGTGATGTG ATCGCGTTAT TTGGTTTAGT TCCGCGTCGT
GTTGGCCCGC ATGTTAAGCC GATGTTTGAA ATGCATTTTC GCGATAACCA ACACGGCTTA
CTGGAATGGT TAGAGGAAAA TCGCGGTGCG CTGAGTGTAC TGATCCATCC GGTATCGGGC
GATGATGCTT ACGATCATCA AGACGACCGT ATCCGCTGGC TCGGTGAGCC GCTAGGTTTA
AATCGCACCA TTTTCCGTTA TACACAGTGA
 
Protein sequence
MFHAHVYFDP DQAIVAERFR QQIARERRDV IALFGLVPRR VGPHVKPMFE MHFRDNQHGL 
LEWLEENRGA LSVLIHPVSG DDAYDHQDDR IRWLGEPLGL NRTIFRYTQ