Gene VC0395_A0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0308 
SymbolviuC 
ID5137430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp326381 
End bp327220 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content51% 
IMG OID640531766 
Productvibriobactin and enterobactin ABC transporter, ATP-binding protein 
Protein accessionYP_001216264 
Protein GI147675717 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACAA TTTGGGATGC TGACTTACAG AGCGCTGCAT TAAAGGCTGA ACATCACAGG 
CTTAAGACTG AGCGACTGAG TTTAGGTTAT GAAGGAAAAT CGGTGTGTGA TGCGCTGGAT
TTGGCGATTC CGCACGGGAA ATTTTCGGTG ATAGTTGGGC CTAATGGCTG TGGTAAATCG
ACCTTGCTAA AAAGCTTGTG CCGTTTACTC AAGCCGCTGG CTGGGCAAGT ATTACTGGAT
GGTCAGAATA TTCACCAATT GCCGACCAAG GTGGTAGCCA AGCAGCTAGG ATTACTGCCT
CAAAGCGCGT TGACACCCGA AGGGATAAAG GTGGTCGATT TGGTCTCTCG TGGCCGTTAT
CCTCACCAAG GGCTATTTCG CCAATGGAGC AGGGTGGATG AACGAGCGGT AGAAGAGGCG
ATGCGAGCCA CTCACGTCCA TGAGCTTGCG CAGCATAGTG TGGATCAGCT TTCCGGCGGT
CAGCGTCAGC GGGTTTGGGT CGCCATGGCG CTGGCGCAGC AAACGCCGTA TTTACTGCTT
GATGAACCAA CCACTTATCT TGATATTGCT CACCAAATCG AACTGCTCGA TCTCTTTTGG
CGGCTTAATC GTCAGCAAGG GCATACTCTA GTCGCCGTGC TGCACGATCT GAATCAGGCG
TGTCGTTACG CTGACCATCT GATTGTGTTG CAAGAAGGCA AAATCGTCGC GCAGGGCGAT
CCACACTCTT TGGTGACTCC AGCATTGGTT AAGCAAGTCT TTGGGATTGA TTGTGTCGTT
ATGCCCGATC CTATCTCCTG CACGCCTTTG ATTATACCTT ATTCGTTAAA GCGCGGTTAA
 
Protein sequence
MDTIWDADLQ SAALKAEHHR LKTERLSLGY EGKSVCDALD LAIPHGKFSV IVGPNGCGKS 
TLLKSLCRLL KPLAGQVLLD GQNIHQLPTK VVAKQLGLLP QSALTPEGIK VVDLVSRGRY
PHQGLFRQWS RVDERAVEEA MRATHVHELA QHSVDQLSGG QRQRVWVAMA LAQQTPYLLL
DEPTTYLDIA HQIELLDLFW RLNRQQGHTL VAVLHDLNQA CRYADHLIVL QEGKIVAQGD
PHSLVTPALV KQVFGIDCVV MPDPISCTPL IIPYSLKRG