Gene VC0395_A0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0299 
Symbol 
ID5135461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp316005 
End bp316598 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID640531757 
Producthypothetical protein 
Protein accessionYP_001216255 
Protein GI147673823 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTA AGCTAGCCAA CCCAGCACCA CTCGGTCTGA TGGGTTTCGG TATGACCACC 
ATTCTGCTTA ATATCCATAA CGCAGGTTTT TTCCCAATCG ACTCAATGAT TCTGGCGATG 
GGTATTTTTT ACGGCGGTCT GAGTCAAGTT ATCGTCGGCA TCATGTGCTT TAAACGTGGT 
GACACCTTCG GTACAACGGC ATTTACTTCT TACGGTCTGT TCTGGCTGAC GCTGGTTGGT 
TTGATCGTAA TGCCACACAT GGGACTGCCT GCAAGCCCTG CGCCTTTCAT GGGGTGGTAC 
TTGGCTCTGT GGGGCATTTT CACTGGCTTT ATGTTCATTG GTTCTCTGTG CTACCCAACG 
GCGAAACAAG TGGTATTTGG TTCTCTGACC ATCTTGTTTG CTCTGCTGGC TGCTCGTGAT 
TTCACTGGTA GCGAGCTGAT TGGTACTATC GCAGGTTTTG AAGGCATCTT CTGTGGCGCG 
AGCGCTATCT ACTTCGCTAT GGCACAAGTA CTCAATAATG AATACGGCCG TGTTGTTCTG 
CCAATCGGCG AAAAACGTGT GCAGCCAGTG AAAGCGCAAG AGCTTGCTGC ATAA
 
Protein sequence
MSTKLANPAP LGLMGFGMTT ILLNIHNAGF FPIDSMILAM GIFYGGLSQV IVGIMCFKRG 
DTFGTTAFTS YGLFWLTLVG LIVMPHMGLP ASPAPFMGWY LALWGIFTGF MFIGSLCYPT 
AKQVVFGSLT ILFALLAARD FTGSELIGTI AGFEGIFCGA SAIYFAMAQV LNNEYGRVVL 
PIGEKRVQPV KAQELAA