| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0276 |
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| Symbol | |
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| ID | 5137848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 291320 |
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| End bp | 291886 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531734 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216232 |
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| Protein GI | 147673230 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00556967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAACT TCCAGCCACA TAAACAGTGT GGATACGGTG TGATTATGAG ACTGACATCT
AAAGGAAGAT ATGCGGTAAC AGCCATGTTA GATGTGGCTC TGCATTCGCA ACAAAACCCA
GTACCGTTGG CGGACATTTC TGAGCGCCAA GGCATTTCTC TCTCGTACTT AGAGCAGCTT
TTTTCTAAGT TACGTAAAGC GGGCTTAGTC GCCAGTGTGC GCGGTCCGGG CGGCGGTTAT
CGCTTAGGAA TGGACTCATA CGCCATTTCT ATTGGTACTG TGATTGCCGC GGTTGATGAA
TCGGTCGATG CGACCAAATG CAACGGGAAA GGGGATTGTC AGGGCGGGAC TCGCTGTCTG
ACTCACACAC TGTGGCGTGA TCTCAGCTCA CGCATTACGG ATTTTCTTAA CAACATCACG
CTCGGTGAGC TGATGATGGA TAACGAAGTT CTCGAAGTTT CAGATCGTCA AGATCTTCAT
CTTGCGGTCA GCCAAAGGGT TTCGCAAAAC AACTCAAACA CAGTCACCAT TGGTGCTGCG
CCTTTTGGTA TTAATGTTCG CTCATAG
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| Protein sequence | MENFQPHKQC GYGVIMRLTS KGRYAVTAML DVALHSQQNP VPLADISERQ GISLSYLEQL
FSKLRKAGLV ASVRGPGGGY RLGMDSYAIS IGTVIAAVDE SVDATKCNGK GDCQGGTRCL
THTLWRDLSS RITDFLNNIT LGELMMDNEV LEVSDRQDLH LAVSQRVSQN NSNTVTIGAA
PFGINVRS
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