| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0265 |
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| Symbol | |
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| ID | 5137554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 278203 |
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| End bp | 279108 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531723 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001216221 |
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| Protein GI | 147673590 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000402003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT GGCCAAGCCT CAAGCAGTTA TCTTATTTGG TGACACTTTA TGAAACCCGC
CATTTTAGTG AGGCGGCTGA GCGTTGCTTT GTCAGTCAAT CGACCTTAAG TAAAGGCATT
CAAAACCTTG AAGAGTTGAT CGGCTGTTCC TTGTATGAAA AGCAAGATAA GAAAAGCCCT
CTGGTATTTA CTCGGGTCGG AGAGTTGGTG GTCAAGCAGG GGCGAGAATT GCTCGCCAAG
GGGCAAGATT TAGTCGAGCT TGGTAAGTTG TGCCAAGGTG ACACCATGGA AGGGCAATTG
CGTTTGGGGT GCATTCCAAC CATTGCGCCG TTTTTGTTGT GTGATTTAGT CCAAGAGATT
AACCAGCGTT ACCCTAAATT GCACTTATTG TTGCGCGAAG ATACCACGGC AAATCTGCTT
TCCGCCTTGC GCAGTGGTGA ACTGGATGTG TTGATCCTCG CCTTACCCGT CGATATTGGC
AATATGGAGA GCTATGTGGT GGGGCAAGAT CCGTTTCGTA TGGTGATCAG CCGTAACCAA
GTTAATCAGA TCCGCGTGCC GATCCGCTAC GCTGATCTAC CCGATGAATC GGTGTTTTTA
CTCGAAAACG AGCACTGTTT AACTGAACAT GCCGTATCGG CTTGTAAGCT CACCGATAAA
GAGAAGATTA ATCCATTTAC CGCGGCCAGT TTGCATACCT TAGTGCAAAT GGTGGCCAAT
GGCTTAGGTA CGACTTTTAT TCCGCAAATG GCCATCGACC ACGGTTTGCT GGATAACCAA
AATCTGGTGG TGATCGACCC TCCTGGGCAA AAAGCTTACC GAGAAATCGG CCTAGTGTGG
CGTCCAAGTT CTTCCCGAAT TCACACTTTT CGCCAGTTAG CTGAGATAGT GGCTGAGCTG
TTATAG
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| Protein sequence | MNKWPSLKQL SYLVTLYETR HFSEAAERCF VSQSTLSKGI QNLEELIGCS LYEKQDKKSP
LVFTRVGELV VKQGRELLAK GQDLVELGKL CQGDTMEGQL RLGCIPTIAP FLLCDLVQEI
NQRYPKLHLL LREDTTANLL SALRSGELDV LILALPVDIG NMESYVVGQD PFRMVISRNQ
VNQIRVPIRY ADLPDESVFL LENEHCLTEH AVSACKLTDK EKINPFTAAS LHTLVQMVAN
GLGTTFIPQM AIDHGLLDNQ NLVVIDPPGQ KAYREIGLVW RPSSSRIHTF RQLAEIVAEL
L
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