Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0262 |
Symbol | |
ID | 5136495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 275298 |
End bp | 276074 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640531720 |
Product | hypothetical protein |
Protein accession | YP_001216218 |
Protein GI | 147675249 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.322774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAT TGGATAAGAA AGTCTACGAA CGTGAATTAG AGCTGCTGCA AATTGAGCTA GTCAAACTGC AAGAGTGGGT GAAACAAGAA AAGCTCAAGC TAGTGGTTAT TTTTGAAGGA CGCGATGCCG CGGGAAAAGG TGGAGTGATC AAAACCATCA CCGAGAAACT CAATCCGCGG GTATGCCGTG TGGCCGCCCT CCCGGCCCCC ACCGAAAAAG AGAAAACCCA ATGGTATTTT CAGCGCTACG TCGCCCATCT TCCGGCCGGT GGTGAAATTG TCTTGTTTGA CCGCAGTTGG TACAACCGCG CGGGAGTCGA AAAGGTGATG GGCTTTTGCA GCGATGAAGA GTATCAAGAA TTTCTGCGCT CTTGCCCTGA ATTTGAACGC ATGCTGCAAC GTTCTGGGAT CATCTTACTC AAATACTGGT TTTCAGTATC CGATGAAGAG CAAGAGCGGC GCTTTATCGA GCGGATTAAT ACGCCACTCA AACGCTGGAA ATTCAGTCCA ATGGATCTCG AGTCTCGTCA GCGCTGGGCA GCCTATTCGA GAGCTAAAGA TGAGATGTTT GCTTACACCG ATACCAAACA CTGCCCGTGG TGGGTGGTGC CTTCGGATGA CAAAAAGCGC GCTCGCCTCA ACTGCATCAG CCACCTACTC AGTAGTGTTG AGTATCAAGA GATTGAGCAT GCGCAGATCT CTCTGCCGGA AATCAATAAG CAAGGTTACG TACGCCCCCC CATCGAAGAC CAAACCTTTG TTCCACAGCG CTACTAA
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Protein sequence | MAKLDKKVYE RELELLQIEL VKLQEWVKQE KLKLVVIFEG RDAAGKGGVI KTITEKLNPR VCRVAALPAP TEKEKTQWYF QRYVAHLPAG GEIVLFDRSW YNRAGVEKVM GFCSDEEYQE FLRSCPEFER MLQRSGIILL KYWFSVSDEE QERRFIERIN TPLKRWKFSP MDLESRQRWA AYSRAKDEMF AYTDTKHCPW WVVPSDDKKR ARLNCISHLL SSVEYQEIEH AQISLPEINK QGYVRPPIED QTFVPQRY
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