Gene VC0395_A0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0262 
Symbol 
ID5136495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp275298 
End bp276074 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content50% 
IMG OID640531720 
Producthypothetical protein 
Protein accessionYP_001216218 
Protein GI147675249 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.322774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAT TGGATAAGAA AGTCTACGAA CGTGAATTAG AGCTGCTGCA AATTGAGCTA 
GTCAAACTGC AAGAGTGGGT GAAACAAGAA AAGCTCAAGC TAGTGGTTAT TTTTGAAGGA
CGCGATGCCG CGGGAAAAGG TGGAGTGATC AAAACCATCA CCGAGAAACT CAATCCGCGG
GTATGCCGTG TGGCCGCCCT CCCGGCCCCC ACCGAAAAAG AGAAAACCCA ATGGTATTTT
CAGCGCTACG TCGCCCATCT TCCGGCCGGT GGTGAAATTG TCTTGTTTGA CCGCAGTTGG
TACAACCGCG CGGGAGTCGA AAAGGTGATG GGCTTTTGCA GCGATGAAGA GTATCAAGAA
TTTCTGCGCT CTTGCCCTGA ATTTGAACGC ATGCTGCAAC GTTCTGGGAT CATCTTACTC
AAATACTGGT TTTCAGTATC CGATGAAGAG CAAGAGCGGC GCTTTATCGA GCGGATTAAT
ACGCCACTCA AACGCTGGAA ATTCAGTCCA ATGGATCTCG AGTCTCGTCA GCGCTGGGCA
GCCTATTCGA GAGCTAAAGA TGAGATGTTT GCTTACACCG ATACCAAACA CTGCCCGTGG
TGGGTGGTGC CTTCGGATGA CAAAAAGCGC GCTCGCCTCA ACTGCATCAG CCACCTACTC
AGTAGTGTTG AGTATCAAGA GATTGAGCAT GCGCAGATCT CTCTGCCGGA AATCAATAAG
CAAGGTTACG TACGCCCCCC CATCGAAGAC CAAACCTTTG TTCCACAGCG CTACTAA
 
Protein sequence
MAKLDKKVYE RELELLQIEL VKLQEWVKQE KLKLVVIFEG RDAAGKGGVI KTITEKLNPR 
VCRVAALPAP TEKEKTQWYF QRYVAHLPAG GEIVLFDRSW YNRAGVEKVM GFCSDEEYQE
FLRSCPEFER MLQRSGIILL KYWFSVSDEE QERRFIERIN TPLKRWKFSP MDLESRQRWA
AYSRAKDEMF AYTDTKHCPW WVVPSDDKKR ARLNCISHLL SSVEYQEIEH AQISLPEINK
QGYVRPPIED QTFVPQRY