Gene VC0395_A0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0222 
SymbolanmK 
ID5136346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp229433 
End bp230545 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content54% 
IMG OID640531682 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001216185 
Protein GI147673249 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC GCGAACTCTA TATCGGTGTG ATGTCGGGAA CCAGTTTGGA TGGTGTGGAT 
ACCGCTTTAG TGGCACTGCA AGACGATAAC ATCGAACTGC TGGCTCACCA CGACTACCCT
ATGCCTGCCG ACCTCAAGCA GCGGCTACTC AATGTCTGCA TCGGCCAACC AACCACCTTG
ATTGCGATGG GTGAATTAGA GCACGATCTG GGTCATTTGT TCAGTGATGC GGTGCTGGCG
CTTTTGCAGC ACAGCGGTTA TCGCGCCGAG CACATTCGTG CGATCGGCTG TCATGGACAA
ACCGTGTTCC ATCAGCCTAC CGGCACCAAA CCTTTTACCA TGCAAATTGG CGATGCCAAC
ATTATCGCGG CGCGCACAGG CATTACGACT GTCGCCGATT TTCGGCGCAA AGATGTTGCG
CTCGGTGGGC AAGGCGCACC GTTAGTTCCC GCGTTTCATC GCACGATTTT TCATGCTGAG
CAATCGACCG TGGTCGTGCT CAATATCGGG GGGATTGCTA ATATTTCGGT GCTCAAGCCC
AATGGTGAAG TGGTGGGCTA TGACACCGGC CCCGGCAATA TGCTGATGGA TAGCTGGTGC
CAAAAAGAAC GTAACCAGCC TTACGATAAA GATGCCCTGT GGGCCAAACA AGGCAGCGTG
AATGCCGCAT TACTTAGCCA TTTAAAACAA GACCATTACT TTGCTCTGCC AGCACCCAAA
AGCACAGGCC GCGAGCTGTT TAATCTGCCT TGGTTAGAAA CGCAGCTCGC CACGTTTTCG
GTTGATGCCA CTGATGTGCA ACGCACCTTG TGTGAATTCA CCGCGCAAAC CATTGTTGAG
CAAGTCGCAC CATTCGCCGA AGGGCCACAA CCACAGCTTT TAGTGTGTGG CGGCGGTGCG
CAAAATCCTT TACTCATGGA ACGCTTACAA GCCTTGCTGC CAAGCTGGCA AGTTGCCCCG
ACCACCCAAA TGGGCGTGGA TGGCGATAAT ATGGAAGCCA TGGCTTTCGC TTGGCTGGCA
CAAAGGCGCA TGCACGGTTT ACCCAGTAAT TTGCCCGCCG TAACGGGCGC ATCACGTCTT
GCGAGTCTTG GCGTGATTTA CTACCCCGAT TAA
 
Protein sequence
MAERELYIGV MSGTSLDGVD TALVALQDDN IELLAHHDYP MPADLKQRLL NVCIGQPTTL 
IAMGELEHDL GHLFSDAVLA LLQHSGYRAE HIRAIGCHGQ TVFHQPTGTK PFTMQIGDAN
IIAARTGITT VADFRRKDVA LGGQGAPLVP AFHRTIFHAE QSTVVVLNIG GIANISVLKP
NGEVVGYDTG PGNMLMDSWC QKERNQPYDK DALWAKQGSV NAALLSHLKQ DHYFALPAPK
STGRELFNLP WLETQLATFS VDATDVQRTL CEFTAQTIVE QVAPFAEGPQ PQLLVCGGGA
QNPLLMERLQ ALLPSWQVAP TTQMGVDGDN MEAMAFAWLA QRRMHGLPSN LPAVTGASRL
ASLGVIYYPD