| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0215 |
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| Symbol | lspA |
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| ID | 5136803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 222329 |
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| End bp | 222844 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531675 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001216178 |
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| Protein GI | 147674341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0133386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATT CGTCTCTGAC TCTTAAACAA TCTGGATTGC GCTGGCTGTG GCTGGCGCTT
CTGGTTTTCA TTGCTGACAT CACGATCAAG TTAATTGTGA TGGATAACAT GGGCTATGGT
TGGGCAAACC GTATTGAGGT GCTGCCTTTC TTTAACCTGC TGTATGTGCA TAACTATGGC
GCGGCTTTTA GCTTTCTGAG CGATCAGGAA GGGTGGCAGC GCTGGCTATT TACGGGTATT
GCCTTTGTGG TCACCGGCAT GCTCGCTTAC TGGATGCGTC GTCTTCCGGC GAGTGATAAG
TGGAACAATA TTGCCTACGC ACTGATCATC GGTGGTGCCG TGGGCAATGT GTTCGATCGC
ATCGTGCATG GTTTTGTGGT CGATTATCTC GATTTTTACT GGGGAACCTA CCACTGGCCA
GCATTCAATC TGGCCGACAG TACGATCTGT ATCGGTGCAG CGATGATTAT TCTCGATGGT
TTTCGCGCTA AGAAAAGTGC GCCAAGTCAG TCTTAG
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| Protein sequence | MSNSSLTLKQ SGLRWLWLAL LVFIADITIK LIVMDNMGYG WANRIEVLPF FNLLYVHNYG
AAFSFLSDQE GWQRWLFTGI AFVVTGMLAY WMRRLPASDK WNNIAYALII GGAVGNVFDR
IVHGFVVDYL DFYWGTYHWP AFNLADSTIC IGAAMIILDG FRAKKSAPSQ S
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