| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0213 |
|---|
| Symbol | ribF |
|---|
| ID | 5136388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 218465 |
|---|
| End bp | 219433 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640531673 |
|---|
| Product | bifunctional riboflavin kinase/FMN adenylyltransferase |
|---|
| Protein accession | YP_001216176 |
|---|
| Protein GI | 147675076 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000227135 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA TACGCGGTAT TCATAACATT CAATCTCGCC ATCACGGCTG TGTATTGACG
ATTGGCAACT TTGACGGTGT TCATCTTGGT CATCAACAAG TGCTCAGTCA GGTGGTGCAG
CGTGCCCAGC AGATGGGTTT GCCTTCGGTA GTGATGACGT TTGAACCTCA GCCCCTAGAG
CTGTTTGCCA AACAACAAGC GCCCGCGCGT TTAACACGTC TGCGCGATAA GTTTGTGCAA
CTCAGCAAAC TCGGGGTTGA TCGCCTGCTG TGCGTTAATT TCAACCATCA TTTTGCCCAA
TTGGATGCCC ACACGTTTAT TCGTGACTTG TTGGTGACCC GTTTGGGTGT TAAGTTTCTG
GTGGTTGGTG ATGATTTCTG CTTCGGTAAA GAGCGTCAAG GTAACTTTGC GCTGCTACAA
CAGGCAGGGC AAGCCTTAGG TTTTGAGGTG GTGAGCACCC GAAGCTTCTG TTTGCAACAA
CTGCGCGTGA GTAGCACCGC GATTCGTGAA GCGTTAGCGG CTGACCAATT GAGCAGTGCC
TCGGCTATGT TGGGGCGCCA TTACAGCATC AGTGGTCGTG TCTCGCATGG TCAAAAACTC
GGGCGAACAA TCGGCTTTCC CACCGCTAAC ATTCCACTGA AACGTTGTGT TTCTCCGGTT
TCTGGAGTGT ATGTGGTTGA AGCCTATGGT TTGGGCCCAA CGCCAGTCGG TGGGGTTGCC
AATATCGGTA ATCGTCCGAC GGTCGATGGT GTTCGCCAGC AGCTAGAAGT GCACTTTTTT
GACTTTCAAG GCAACCTGTA CGGAAAGCAG TTGGAAGTCG CGCTGTTACA TAAACTACGT
GATGAGCGCA AATTCGCCTC TTTTGAGGCA CTAAAGCAAC AAATTGAATT GGATGCTGAA
GCAGCAAGGG TGTGGCTGCG TCAGCTTAAG GGTTGCTCGG TTGATTCCAC CCAGCAACAA
CATGTCTAA
|
|---|
| Protein sequence | MELIRGIHNI QSRHHGCVLT IGNFDGVHLG HQQVLSQVVQ RAQQMGLPSV VMTFEPQPLE
LFAKQQAPAR LTRLRDKFVQ LSKLGVDRLL CVNFNHHFAQ LDAHTFIRDL LVTRLGVKFL
VVGDDFCFGK ERQGNFALLQ QAGQALGFEV VSTRSFCLQQ LRVSSTAIRE ALAADQLSSA
SAMLGRHYSI SGRVSHGQKL GRTIGFPTAN IPLKRCVSPV SGVYVVEAYG LGPTPVGGVA
NIGNRPTVDG VRQQLEVHFF DFQGNLYGKQ LEVALLHKLR DERKFASFEA LKQQIELDAE
AARVWLRQLK GCSVDSTQQQ HV
|
|---|
| |