Gene VC0395_A0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0205 
Symbol 
ID5136380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp210698 
End bp211492 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID640531665 
Producthypothetical protein 
Protein accessionYP_001216168 
Protein GI147675364 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATATTG AACTCTTAGC TATACTGCTG CTGTTAGGGG CAGTGGTGGG TGTGCTTGCT 
GGCTTATTGG GCATTGGTGG CGGCTTACTA GTGGTCCCCG CTCTACTGTT TTTACTGCCT
TATGCTGGCA TCTCGACCGA GATTGTGATG CAGCTTGCGC TGGCCACATC GTTAGCGACG
ATCATACTCA CATCAGGCTC ATCGGCACTA AACCATCTAA AGCTGGGTAA TGTCGATGTT
TTTGTCGTGA AATGGTTAAT GCCGGGTGTG GTGGTCGGTG GGTTTTTAGG CTCAGTGGTT
GCCGAATGGA TCCCAAGCCA ATATTTACCC AAAGTGTTCG GGGTCATTGT GCTCTGTTTG
AGTGTGCAGA TGTACCGTTC GATACGTGCA TTGCAAAATC ATCCAATGCC AAGTGCATGG
ATTACCACCT TGTGCGGTAC CGGCATTGGG GTAATCTCAA GTTTGGCCGG TATTGGCGGC
GGTTCTTTAT CGGTGCCATT TTTGAATCGA CATGGCATTG AAATGAAAAA GGCGATAGGT
TCTTCATCGG TCTGTGGTTT TGCGATTGCG ATATCGGGCA TGATTGGTTT TATTTTGCAC
GGTTATCAAG TGGAGAACTT GCCACAATAC AGCCTTGGTT ATGTTTATTT ACCTGCATTG
TTAGCGATTG CTACAACATC GATGCTTACC ACGCGAATTG GCGCTAAACT TGCCACCCAA
ATGCCAACAG CAAGGCTTAA GCGATTCTTT GCCATTTTTT TAATGTGCGT CGCTGTGACC
ATGTTGTTCC AGTAA
 
Protein sequence
MNIELLAILL LLGAVVGVLA GLLGIGGGLL VVPALLFLLP YAGISTEIVM QLALATSLAT 
IILTSGSSAL NHLKLGNVDV FVVKWLMPGV VVGGFLGSVV AEWIPSQYLP KVFGVIVLCL
SVQMYRSIRA LQNHPMPSAW ITTLCGTGIG VISSLAGIGG GSLSVPFLNR HGIEMKKAIG
SSSVCGFAIA ISGMIGFILH GYQVENLPQY SLGYVYLPAL LAIATTSMLT TRIGAKLATQ
MPTARLKRFF AIFLMCVAVT MLFQ