Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0204 |
Symbol | ptsP |
ID | 5135181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 208442 |
End bp | 210688 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640531664 |
Product | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain |
Protein accession | YP_001216167 |
Protein GI | 147673679 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCTC AGCTAAGGGA TATAGTAGAA CAAGTTTCAA AAGTCGAAGA CGTCTATCAG GCGTTGGATA TTTTTGTAAA GCAGACCTGT GAGGCGATGA GCACAGAGTG TTGTACTGTC TATTTAGCGA ATGAAGAGAT GCACCGTCTG GAATTGATGG CCACACAAGG TCTGAAGTTC AAGGGCGATA AGATCCATAT TGATTTTGAT GAAGGCTTGG TCGGGTTGGT TAAACGTTCT GCCGAACCGA TTAACTTAGC CGAAGCCTCA AAACATCCGA GCTTTAAATA TTTTAAGCAG TTGGGTGAAG AGGTTTATCA CTCCTTCCTC GGTACACCGA TCATCTATCG CAAACAGGTG CTTGGTGTGC TGGTGGTGCA GCAAAAATCT CCCCGTTTAT TTAGCGAGAT GGAAGTCTCC TTTTTAGTTA CCCTTGCAGC GCAGCTCGCG GTGCTGGTGG CGCATGCTCA AACGCAAGGT CACTGGCGTT TATCCAAAAA GCAGCAGGCC ATTACGGGTG TTGCCGCCTC TTCTGGGGTC GCGATTGGTG AGTTTTGGTG GGATGATACC CAGCCAGATC TGTCCGAAGT GCTACCCGCC TCAGCTCTGG ATCCTGATTT TGAGCAAGAG CGTATTGCCT TGGCAGTAGA GAGTGCGCTG GCCGATTTTC GTCGGATGCG TAAAAAGCTC GATGGGGATA TCAACAAAGA AGCGTTAGCC ATTTTTGATC TGTTCACTCA CTTATTGAAC GATCCTATGC TGCGGAAAGA TCTCAAAGCG CAGATCCAAA AAGGGGATCG TGCCGATTGG GCGCTGCGCC AAGTGGTCGA AAGTTACTCG AACCGTTTTG CGCGCATGTC GGATGTTTAT CTGCGAGAGC GAGCGCAAGA CATTCGTGAG TTAGGACAAC GTTTACTGTT TTTCTTGCTC AATACCGAAA CCAATCAGCC CAAAATCGAT AAGCCGGTTA TCTTGGTGGT GCGAGAGCTG ACCGCGAGCG TGTTAGCCGC ACTGCCCAAA GATAAGCTGC TGGCTGTCGT CTCTCTTGAA GGCGCGGCCA ACTCCCATGC GGCTATTTTG TCGCGCGCGT TAGGCATTCC TGCGGTGATG GGGGTATCGA TTAACCTGCG CGATCTGAAT GGCAAAAAAG GTATTGTCGA TGGCTACAGC GGTAAGTTAT TCATTTCGCC TTCGAAAACC ATTCTGAATG AGTATCGTGC CTTAGCGAAT GAAGAGCGTG AGCTGTCGCG CATGGTCAAT GAGGCGATTC GTGAGCCCGC ATGTACTCTT GATGGCGCAC GAATCGAATT GTTACTGAAT GCCGGTTTGA GTGCCGATAC CAGTATTGCC GTCAATCAAG GGGTGGATGG CGTTGGGTTG TATCGCACAG AAATCTCTTT CTTACTGCAG CACCGATTTC CCTCAGAAGA GGAGCAGACT CAGCAATATC GGCATGTGCT GAACACTTAC CCTCATCAAC GTGTTGTTAT GCGTACGCTC GATATCGGTG GTGATAAGCC TTTACCTTAC TTGCCGATTG AAGAAGACAA CCCATTTCTC GGTTGGCGTG GTATCCGTTT TACCTTAGAT CATCCTGACA TTTTTATTAT CCAACTGCGC GCCATGCTCA GAGCAAGTGC GGAGTCGGGG AATTTATCCA TCTTGCTGCC GATGATTTCC GGTGCCAAAG AGCTGGATGA TGCGCTGAAG TTTATCTATC AAGCCTATCA AGAAGTTTCG CAACAAGATC CACGCGTGGT GATGCCGCAA ATCGGGATCA TGCTCGAAGT ACCTTCGATG CTATATCTGC TGCCACTGAT TGCCGATAAA ATTGATTTCG TCTCTGTCGG TACAAACGAT TTGACCCAAT ATCTGCTTGC CGTGGATCGT AACAATGCGC GTGTGGCGGA TGTGTATGAA TCTATGCATC CTGCGGTGGT GATGGCACTG AAGCAGATCC AACAGACTTG TGCGACCCAT CAAATACCCG TGTGTGTCTG TGGTGAGTTA GCCGGAGATC CGATTGGTGC TTTGCTGTTG ATAGGGTTAG GCTACACCAC CTTAAGTATG AACACGTCTA ACGTCGCTAA AGTGAAATAT CTAGTGCGAC ACTCTGAACT GGCGGAATTA ACCCAGCTCG CTGAGCAGGC ATTAACCCAA CCTTATGGAC GAGAAATCTA CAATATGATG CTCGCCTATA TCGAAAAACA CGGTTTTGCA GGTTTTGTCC GTGCAGGCAA AAAATAG
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Protein sequence | MLSQLRDIVE QVSKVEDVYQ ALDIFVKQTC EAMSTECCTV YLANEEMHRL ELMATQGLKF KGDKIHIDFD EGLVGLVKRS AEPINLAEAS KHPSFKYFKQ LGEEVYHSFL GTPIIYRKQV LGVLVVQQKS PRLFSEMEVS FLVTLAAQLA VLVAHAQTQG HWRLSKKQQA ITGVAASSGV AIGEFWWDDT QPDLSEVLPA SALDPDFEQE RIALAVESAL ADFRRMRKKL DGDINKEALA IFDLFTHLLN DPMLRKDLKA QIQKGDRADW ALRQVVESYS NRFARMSDVY LRERAQDIRE LGQRLLFFLL NTETNQPKID KPVILVVREL TASVLAALPK DKLLAVVSLE GAANSHAAIL SRALGIPAVM GVSINLRDLN GKKGIVDGYS GKLFISPSKT ILNEYRALAN EERELSRMVN EAIREPACTL DGARIELLLN AGLSADTSIA VNQGVDGVGL YRTEISFLLQ HRFPSEEEQT QQYRHVLNTY PHQRVVMRTL DIGGDKPLPY LPIEEDNPFL GWRGIRFTLD HPDIFIIQLR AMLRASAESG NLSILLPMIS GAKELDDALK FIYQAYQEVS QQDPRVVMPQ IGIMLEVPSM LYLLPLIADK IDFVSVGTND LTQYLLAVDR NNARVADVYE SMHPAVVMAL KQIQQTCATH QIPVCVCGEL AGDPIGALLL IGLGYTTLSM NTSNVAKVKY LVRHSELAEL TQLAEQALTQ PYGREIYNMM LAYIEKHGFA GFVRAGKK
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