| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0193 |
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| Symbol | brnQ |
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| ID | 5135831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 198755 |
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| End bp | 200068 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531653 |
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| Product | branched chain amino acid transport system II carrier protein |
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| Protein accession | YP_001216156 |
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| Protein GI | 147673070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.820087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAGA CGTTAAAACT AGCAGATATT TTAGCTTTGG GCTTTATGCT GTTCGCCTTC
TTCTTAGGCG CAGGCAATAT CATTTTTCCA CCTCTCGCTG GCCAGTTGGC GGGTGAGAAC
ATTACTCCTG CCATGTTCGG CTTTTTGCTG ACCGCTGTGG GTTTGCCGCT GATCACTATC
ATCGCGATTG CCGTTGCGGG TGGTAGCTGG GAGCATCTCA CCAAAGATCT GCCTGTAAAA
GCTTCTGTGC TGATGGCAGC ACTGATTCTG ATCGTCATTG GTCCTGCATT TGCAGCTCCT
CGTACGGGTC TGGTGGCTTA CGAAATGGCA GTAAAACCAT TTTTTGCAGA GAGCACTCAA
TCTTATCTCA CGCTTTTCTC TGTGCTGTTT TTTGCAGTTG CGATGTTCTT CTCATGGTCG
CAAGGCAAAC TGGTTGATTT GATTGGTAAA CTGCTGACAC CAGCGCTCTT TATCGGTCTG
ATTATCCTTG CTCTGGGCGT GTTCATGAAC CCACAAGGTG AGATGATTGC TGCGCAAGGT
GAGTACCTAA GCCAACCTCT GACCAAAGGC TTCTTGGAAG GCTATAACAC CATGGATACT
TTCGCATCGT TGATGTTTGG TATCTTGATT GTCGATGCAC TGCGTAGCAA AGGGATTACC
GATCGTGCGG CGACTACCCG TTATCTGATC ACTTCAGCGG TGATTGCGGC AATTGGTTTG
GCGTTGGTTT ACGGCTCGCT CTTCTATCTT GGTGCAACCA GCTCAAGTGT GGCGGCGGGG
GCCAACAACG GCGGCGCGAT TTTAAGCCAA TATGTACAAG CTCTCTTTGG TAGCTACGGT
CAGTTGGTTC TCTCGGTTAT CGTTATGCTG GCTTGTTTGA CCACGGCGGT TGGCTTGATT
TCAGCGTGTT CTGATTTCTT CAGCAAACAC ACGTCGCTAT CTTACAAACA GTGGGTAGTG
ATTAATGGTG TAGCGTGTGG TGTTGTGGCG AACGTTGGTT TGGCACAGCT CATCACACTC
TCGATTCCTG TACTGTTTGC TCTGTACCCT GTGGCGATTG CTCTGGTCGC ATTGACTTTC
GTGCGTCACA AACTGCCAAA CCCACGGGTA GCATACCGTG CTGTGCTGTC CGTTTCTCTG
CTGGTGGCGT TACTGGATGC GGCAAAAGTT GCGGGCTTTG ATGTTTCTGC GTTCAGCTTC
CTACCTTTCT TTGAGTACGG TATGGGCTGG TTGCTACCGA CTTGTGCTGC GATGATCTGC
ATGTTCTTTA TTCCTTCAGC ATCATCCCCT GTTCTAGAAG AAGAGCTAGC ATAA
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| Protein sequence | MKQTLKLADI LALGFMLFAF FLGAGNIIFP PLAGQLAGEN ITPAMFGFLL TAVGLPLITI
IAIAVAGGSW EHLTKDLPVK ASVLMAALIL IVIGPAFAAP RTGLVAYEMA VKPFFAESTQ
SYLTLFSVLF FAVAMFFSWS QGKLVDLIGK LLTPALFIGL IILALGVFMN PQGEMIAAQG
EYLSQPLTKG FLEGYNTMDT FASLMFGILI VDALRSKGIT DRAATTRYLI TSAVIAAIGL
ALVYGSLFYL GATSSSVAAG ANNGGAILSQ YVQALFGSYG QLVLSVIVML ACLTTAVGLI
SACSDFFSKH TSLSYKQWVV INGVACGVVA NVGLAQLITL SIPVLFALYP VAIALVALTF
VRHKLPNPRV AYRAVLSVSL LVALLDAAKV AGFDVSAFSF LPFFEYGMGW LLPTCAAMIC
MFFIPSASSP VLEEELA
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