Gene VC0395_A0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0189 
SymbolrimI 
ID5136629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp191930 
End bp192415 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID640531648 
Productribosomal-protein-alanine acetyltransferase 
Protein accessionYP_001216151 
Protein GI147674031 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGCAA ATTTGCGCTC ATCAAGGAAT CGCATCATGA CGACTGTTTT TACTGCAATG 
CAACCGACCC ATCTGGATGC TGTTTGGCGC ATTGAATGTG CAGCGCATTC CCATCCTTGG 
GCGGAGTCCT TAGTGCGTGA TTTAACTAGC CGTGGAGCAT GCCATCAAGT CATGTTGGTG 
GATCAACAGG TTGTGGGGTA TTTCTATGCC CAGAATATTG TTGGCGAAGT GACCTTATTG 
AATATTGCGA TTGATCCGGC GCAGCAAGGC AAAGGTTATG GTCAGCAGCT TTTGCAGCAC 
TTTATTGCGT TGTGTGAACA GCAAAAAGCA GAAAGCGCAT GGCTAGAAGT GCGCGAAAGT 
AATCAGCGAG CTTTTGCGCT GTATCAGCGA GCGGGGTTTA ATGAAATCGA TCGCCGTGTT 
AACTATTACC CCGTGGCAAA GGGTAAAAGT GAAGATGCGA TCATCATGAG CTACCTATTT 
TTGTAA
 
Protein sequence
MAANLRSSRN RIMTTVFTAM QPTHLDAVWR IECAAHSHPW AESLVRDLTS RGACHQVMLV 
DQQVVGYFYA QNIVGEVTLL NIAIDPAQQG KGYGQQLLQH FIALCEQQKA ESAWLEVRES 
NQRAFALYQR AGFNEIDRRV NYYPVAKGKS EDAIIMSYLF L