Gene VC0395_A0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0185 
Symbol 
ID5135691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp190437 
End bp190964 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content44% 
IMG OID640531645 
Producthypothetical protein 
Protein accessionYP_001216148 
Protein GI147674979 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAACA AGATTCGCAC TCAACTGGTT CAGAACGCTG CTTCAATTTT GCGATCTCCA 
ATCCACTTAT TGCCCCAAAA CGTTCAAAAA AAAGCCTTGC TTGATGCAAT GGGTTTAGTA
TTCCGCGAAG CCTTACAGGA CGGAGACTTC GAATTCCTCG AAGATAAATG GCTGAAAGTC
GAAGTAAAAG ACATGGAATT GCGCTGGTTT ATCAGTTACC AAAACGACAA GTTAGTCGTC
GCAGATAAAC CCGTCGCTGA AGATGTGAGT TTTAGCGGAA ATCTGAATGA TTTGGTTTTA
ATCGCCGGAC GTAAGGAAGA TCCAGATACG CTGTTCTTCC AGCGTCGACT CTCCATCGAA
GGGGATACCG AACTCGGTTT GGAAGTGAAA AACCTGATGG ATAGCGTGGA TCTACAACAA
TTGCCGAAAG CGTTACAGAT TTTGCTTCAC CAACTGGCCG ATTTTGTGCA TAAAGGGATG
CAAACGCCGA ATTCATCCCA CGAGGTTATT AATGCTTATT CGAACTGA
 
Protein sequence
MLNKIRTQLV QNAASILRSP IHLLPQNVQK KALLDAMGLV FREALQDGDF EFLEDKWLKV 
EVKDMELRWF ISYQNDKLVV ADKPVAEDVS FSGNLNDLVL IAGRKEDPDT LFFQRRLSIE
GDTELGLEVK NLMDSVDLQQ LPKALQILLH QLADFVHKGM QTPNSSHEVI NAYSN