Gene VC0395_A0163 details

Gene Information

• Locus tag: VC0395_A0163
• Symbol: greA
• ID: 5137237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 167192
• End bp: 167668
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640531623
• Product: transcription elongation factor GreA
• Protein accession: YP_001216128
• Protein GI: 147675665
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000000328888
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGAAA AAGTTCCAAT GACAGCGCGT GGTGAAAAGC TACTGCGTGA AGAACTCGAT 
AGACTATTAA AGCTCAGACC TAAAATTACA GAAGCGATTG CCGAAGCTCG TGAGCTTGGC 
GATTTGAAAG AGAATGCGGA ATACCATGCT GCACGTGAAG AGCAGGGGAT CTGTGAAGCG 
CAAATTCGTG ATATCGAATA CAAGCTATCA GTGGCGCAGG TTATTGATGT CACTAAGATG 
GAAAACAGTG GCAAAGTCAT TTTTGGTGCC ACGGTGACGG TGATTGATGT CAACAGCGAC 
GAAGAGAAGA CTTACCAAAT CGTTGGTGAT GATGAAGCGG ATATCAAATC AGGTCGTATT 
TCAGTCAATT CGCCGATTGC TCGTGGTTTG ATTGGTAAAT TTGAAGGCGA TGAAGTCTCG 
ATTGCGACTC CAGGGGGCAA TAAGGTCTTT GAAATTGATC GCGTGGAATA TCTATAG 

 

Protein sequence

MMEKVPMTAR GEKLLREELD RLLKLRPKIT EAIAEARELG DLKENAEYHA AREEQGICEA 
QIRDIEYKLS VAQVIDVTKM ENSGKVIFGA TVTVIDVNSD EEKTYQIVGD DEADIKSGRI 
SVNSPIARGL IGKFEGDEVS IATPGGNKVF EIDRVEYL