Gene VC0395_A0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0160 
SymboltyrS-2 
ID5136841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp162816 
End bp164003 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content47% 
IMG OID640531620 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001216125 
Protein GI147673048 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.248e-11 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGTA TTGAAGCCGC TTTAGCCGAG ATTAAACGTG GTGTTGAAGA GCTGATCCCC 
GAAGAAGAGC TCATTGCCAA ACTCAAAGAA AATCGTCCGC TACGAATTAA GTTGGGGGCG
GATCCAACGG CTCCGGATAT CCATCTAGGC CACACGGTAA TCCTCAATAA GCTTCGTACT
TTCCAGGATT TAGGTCATGA CGTGACATTT TTGATTGGTG ACTTTACTGG AATGGTGGGG
GATCCAACAG GAAAAAACAC CACACGCCCA CCTTTGACGC GCGAAGATGT ATTGCGTAAC
GCGGAAACGT ACAAGCAGCA AGTGTTCAAG ATCCTCGATC CTGCCAAAAC CAAGATCCAA
TTTAACTCAG AGTGGTTGTC AAAACTGGGA GCGGAAGGGA TGATCCGTCT GGCTTCAAAC
CAGACCGTCG CTCGTATGTT AGAACGTGAT GACTTTAAAA AGCGTTACAA CAATGGTCAG
CCGATTGCGA TTCACGAGTT TATGTACCCA TTGCTACAAG GCTACGACTC TGTTGCGATG
GAGACGGATG TTGAGCTAGG CGGTACTGAC CAGAAGTTTA ACTTGCTGAT GGGGCGTGAG
CTACAAAAAG CCAACGGCCA AAAACCACAA GTGGTATTGA TGATGCCTCT GCTGGTGGGA
TTGGATGGCG AGAAGAAAAT GTCCAAATCA GCGCATAACT ATATTGGTGT GAGCGAAGCG
CCGAGCGAAA TGTTCGGTAA AATCATGTCA ATTTCTGATG ATTTGATGTG GAGCTACTAC
GAGCTGCTCT CTTTCCGTCC GTTAGAAGAA GTGGCCCAAT TCAAAGCAGA GGTTGCTAAT
GGTGCTAACC CGCGTGATAT CAAGATTTTG CTAGCAAAAG AGATCATCGC TCGTTTCCAT
TCTCAAGCCG ACGCTGATGC AGCAGAACAA GAGTTCATCA ACCGTTTCCA AAAAGGGGCG
ATGCCTGAGG AAATGCCAGA GTTTGAATTC GAGTCTGGAA TCGCTATCTC CAATCTGCTT
AAAGAGGCGG GACTTGTGGC TTCTACTTCT GATGCACTGC GCATGATTAA ACAAGGTGCG
GTGAAGCTTG ATGGCGAGAA GTTAGAAGAT GCGAAGCTGA TTCCTGCTTG TGGTACATCG
GTTTACCAAG TGGGTAAGCG TAAGTTCGCT CGAGTGACCA TCAAGTAA
 
Protein sequence
MASIEAALAE IKRGVEELIP EEELIAKLKE NRPLRIKLGA DPTAPDIHLG HTVILNKLRT 
FQDLGHDVTF LIGDFTGMVG DPTGKNTTRP PLTREDVLRN AETYKQQVFK ILDPAKTKIQ
FNSEWLSKLG AEGMIRLASN QTVARMLERD DFKKRYNNGQ PIAIHEFMYP LLQGYDSVAM
ETDVELGGTD QKFNLLMGRE LQKANGQKPQ VVLMMPLLVG LDGEKKMSKS AHNYIGVSEA
PSEMFGKIMS ISDDLMWSYY ELLSFRPLEE VAQFKAEVAN GANPRDIKIL LAKEIIARFH
SQADADAAEQ EFINRFQKGA MPEEMPEFEF ESGIAISNLL KEAGLVASTS DALRMIKQGA
VKLDGEKLED AKLIPACGTS VYQVGKRKFA RVTIK