Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0137 |
Symbol | |
ID | 5135469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 129671 |
End bp | 130729 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531597 |
Product | iron(III) ABC transporter, periplasmic iron-compound-binding protein |
Protein accession | YP_001216102 |
Protein GI | 147674279 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000186976 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGATTGA TAAAGGTTAT CATTACTAGT CAAAAGGAAT ACTCAATGAA AAAACTGCTC AGCCTGTCAG CGATAACGCT CAGTGTGCTT GCCCCTTCTG CTTTTGCCGC TCAAGAAGTC AATGTTTACT CTTATCGCCA ACCGTTTCTG ATTGAGCCGA TGTTTGCTGA ATTTACGAAA GAAACTGGCA TTAAAGTTAA CGTAAAGTTC GCGAAAGAAG GTATCGCTGA AAAGCTTGCT CAAGAAGGCG AATACAGCCC AGCAGATGTG ATCTTAACCT CTGAATTCAG TCGTCTGTTT GAGCTGACCG AAAAAGGTTT GACTCAGCCG CTGGATAGCA AAGTGATTGA AGAGAACATT CCGGCTCAGT ATCGTGACAG TGGCGATGAG TGGTTTGCCC TGACTCAGCG TACTCGCAGT GTCTATTCTT CACGTGACCG CCTAGGTAAG CTCGGTGATG ATTTTGACTA TATGGATCTG GCAAAGCCTG AGTTCAAAGG CAAAATCTGT ACTCGTAGTG GTAAGCATCC TTACAACATC GCATTAGTTG CTTCCATCAT TGCTAACCAC GGTGAAGCTG AAGCAAAAGC TTGGCTAGAA GGCGTTAAAG CGAACCTAGC ACGCAAACCG CAAGGCAACG ATCGTGACCA AGTTCGCGCG ATCAAAGAAG GTCTGTGTGA TGTCTCATTG GGTAACAGCT ACTACCTAGG CGCCATGCTG AATGATCAAG AGCAGAAATC TTGGGCTGAA GCGGTGTACA TCAACTTCCC AGGTCAAAAT GTGCAAGGAA CACACGTTAA CGTGAGTGGT ATGGCGATGG CTAAATACTC ACCTAACCGT GAAAACGCGC AGAAACTGAT GGAGTTTTTG ACTGGTGAAA CGGCTCAGAA AATGTATGCA GAAGTGAACT ACGAATACCC AGTCAAACCG GGTGTACAAC GTTCTGCATT GGTGGAGTCT TGGGGCGAGT TTAAAGCCGA CAGTCTGCCA CTGGAAAAAA TTGCAGATAA CAATGCTGCA GCGATCAAAT TGATCGATGA AGTCAAATTT GACCTGTAA
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Protein sequence | MRLIKVIITS QKEYSMKKLL SLSAITLSVL APSAFAAQEV NVYSYRQPFL IEPMFAEFTK ETGIKVNVKF AKEGIAEKLA QEGEYSPADV ILTSEFSRLF ELTEKGLTQP LDSKVIEENI PAQYRDSGDE WFALTQRTRS VYSSRDRLGK LGDDFDYMDL AKPEFKGKIC TRSGKHPYNI ALVASIIANH GEAEAKAWLE GVKANLARKP QGNDRDQVRA IKEGLCDVSL GNSYYLGAML NDQEQKSWAE AVYINFPGQN VQGTHVNVSG MAMAKYSPNR ENAQKLMEFL TGETAQKMYA EVNYEYPVKP GVQRSALVES WGEFKADSLP LEKIADNNAA AIKLIDEVKF DL
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