| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0131 |
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| Symbol | mrcB |
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| ID | 5136016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 119547 |
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| End bp | 121880 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531591 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001216096 |
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| Protein GI | 147674464 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGAA AAAGTAGTAA CAGATCGCGT GGCCGTAAAG CGCGCAGTGG TAAAAGTGCC
TCTTCCTCCA AGCTGCAAAT CTGGCTGGGA AGGATTTGGA GTATCGGCTG GAAATTAGCG
CTGACGCTGG CCGCAGTGCT GGTTTTTATT GGTATCTATC TCGATTCGAT GATCAAACAG
CGCTTTGAAG GTCAGCTGTT TGATCTGCCG ACCGTGGTCT ATGCCCGTAT TTTAACGCTT
GAGCCCGGCA ACGGCCTCAG TTTGCAAGAA CTGCGCAATG AGCTGGATGT CCTCAATTAC
CGCAAAGTGG CACAGCCCCG TTTCCCCGGT GAATACGCGT CTTCTTCCAG TCGAATTGAG
CTGATCCGCC GTCCGTTTGA ATTCGCGGAT GGTCCAGAGC CGGATCGCCG AGTGATGCTT
ACCTTTGATG GCAGTGGTTT GAACAAAATC GAATCATTAG AGCAAAAACG CGAGCTAGGC
TACCTGCGTT TAGAGCCAAA ACTGATGGGC ATGCTGGAAA AAGATTCGCC GGAGCAGCGA
CTCTTTTTAC GTCGCGATCA ATTCCCCGAA GTGTTGGTTG ATGCACTCTT AGTCACCGAA
GATCGTGATT TTTATCAGCA CGATGGCGTA TCACCACTTG CGATTGGTCG CGCTATGGTG
GTCAACCTTA AAGCGGGGCG CACGGTGCAA GGGGGCAGTA CCTTGACCCA GCAGCTGGCT
AAAAACATCT TCCTTTCTAG CGATCGCACC TTGTGGCGTA AGCTGCGCGA AGCCTATATG
GCGCTGATCA TCGATTATCG TTACAGCAAA GATCGTATTC TTGAAGCCTA TCTTAACGAA
GTTTATTTAG GGCAAAGTGG CGCAGATGCG ATCCACGGTT TTGGTCTGGC TTCACGGCTC
TATTTTGGTC AGCCGCTGCA AGAGCTACGG ATTGATCAAT TGGCATTGTT GGTTGGCATG
GTTAAAGGGC CTTCTTATTA CAACCCGATG CGTTATGCCG AGCGCGCTCG CGAGCGGCGC
GATCTGGTGC TGAAACTGAT GATGGAGCAC GATATTCTGA CGGCGCCAGA GTACCAGCAA
GCGGTAACTC GTCCGTTGGA TGTGCAGAAA ACCGCGCAAA TCGCTAGCCG TCAGCCAGCG
TATTTCCAGC AAGTTTCTAT TGAGCTGAAA GAAAAACTGG GCGACAAATT TAAAGCGGAT
TCAGGATTGC GGGTGTTTAC CTCGCTCGAT CCGGTTTCGC AGTCCAAACT CGAGCAAGCG
ATCCACGATC AGATCCCGCA ATTAGCGAAA ACCGCAGGCA AAGATCTCGA AGCCGCTGCG
ATCGCTGTGG ATCGTCATAG TGGCGAAATT CGTGCCATGG TCGGCGGTAA GCGAACCGGT
TACGATGGTT TTAACCGCGT GCTCAATGCC AGTCGACAAA TTGGTTCACT GGTGAAACCA
GCGGTGTATC TCACGGCGTT AGCGCATCCC GATCAGTACA ACCTAGCCAC TACACTGGAA
GATAAACCAC TCACCTTAAA AGGCAGTGAA GGCAGCGCGT GGACTCCGCG AAACTACGAT
CGTCAATATC GTGGAGAGGT GCCCCTTTAT TTGGCGCTCG CTCAATCGCT TAATGTGCCG
ACCGTGGCTT TGGGGATGAA GCTTGGGATT GATCAAGTCT CAGCAACCTT GGGTAAGCTC
GGCGTGAATC GCGACGAAAT TCGCCCTGTC CCTTCGATGT TGCTCGGTTC ATTCTCACTC
ACGCCATATC AAGTGGCGCA GATGTATCAA ACGTTGACCA ATTCCGGCAA AAAAGCCCCG
CTGTCAGCGC TACGTTCTGT GCTCGATTTG GAAGGCAATG TGCTGTATGA ATCTCTGCCG
AGAGTGTCAC AAGCGGTGGA TCAGCAAGCC GCTTGGCTGA CGACTTACGC GATGAAACAA
GGGGTGCAAG AGGGGACTGG ACGTTACTTG AATGCGCAGT TCAGCAGTGC AGCACTGGCG
GGGAAAACCG GGACCACTAA CGATAACCGT GACAGTTGGT TTGTGGGGGT CGATGGCCGT
GAAGTGACCA CCATTTGGCT TGGCCGCGAT GATAACCAGC CAACGAAGCT CACTGGCGCG
AGTGGGGCAT TACGTGTTTA TGCGCAGTAT TTGAAATATC GCATTCCAGA GAAATTACAG
TTACCTTGGC CAGAAGGCAT AACGACCTTC GGCTTTGCCA AGCAGACGCA AGGTGGATTG
AAACTCGACT GTGATAATGC GTTTAAACTG CCTATTTGGG ACAATCAACA GCAGTTAAAA
CAGCAGTGTG AAAACCGTCC GACCGAGTGG ATCAAAAAGC TGTTTGAGTG GTAA
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| Protein sequence | MTRKSSNRSR GRKARSGKSA SSSKLQIWLG RIWSIGWKLA LTLAAVLVFI GIYLDSMIKQ
RFEGQLFDLP TVVYARILTL EPGNGLSLQE LRNELDVLNY RKVAQPRFPG EYASSSSRIE
LIRRPFEFAD GPEPDRRVML TFDGSGLNKI ESLEQKRELG YLRLEPKLMG MLEKDSPEQR
LFLRRDQFPE VLVDALLVTE DRDFYQHDGV SPLAIGRAMV VNLKAGRTVQ GGSTLTQQLA
KNIFLSSDRT LWRKLREAYM ALIIDYRYSK DRILEAYLNE VYLGQSGADA IHGFGLASRL
YFGQPLQELR IDQLALLVGM VKGPSYYNPM RYAERARERR DLVLKLMMEH DILTAPEYQQ
AVTRPLDVQK TAQIASRQPA YFQQVSIELK EKLGDKFKAD SGLRVFTSLD PVSQSKLEQA
IHDQIPQLAK TAGKDLEAAA IAVDRHSGEI RAMVGGKRTG YDGFNRVLNA SRQIGSLVKP
AVYLTALAHP DQYNLATTLE DKPLTLKGSE GSAWTPRNYD RQYRGEVPLY LALAQSLNVP
TVALGMKLGI DQVSATLGKL GVNRDEIRPV PSMLLGSFSL TPYQVAQMYQ TLTNSGKKAP
LSALRSVLDL EGNVLYESLP RVSQAVDQQA AWLTTYAMKQ GVQEGTGRYL NAQFSSAALA
GKTGTTNDNR DSWFVGVDGR EVTTIWLGRD DNQPTKLTGA SGALRVYAQY LKYRIPEKLQ
LPWPEGITTF GFAKQTQGGL KLDCDNAFKL PIWDNQQQLK QQCENRPTEW IKKLFEW
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