| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0125 |
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| Symbol | pcnB |
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| ID | 5137556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 111657 |
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| End bp | 113030 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531585 |
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| Product | polyA polymerase |
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| Protein accession | YP_001216090 |
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| Protein GI | 147673822 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000172768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA ACGATTTTGA ACCGAGCAAC ACTCGCACAT ATCCAGACTT AGCTTTGACC
ATCATTCCGC GTCAGGAACA CCCTATCTCG CGTCAGCAGA TCAGCGAAAA TGCGCTGAAA
GTGCTCTATC GTCTGCATGG TGCGGGGTTT GAGGCCTTTC TGGTCGGCGG CGGTGTGCGT
GATTTACTTC TGGGTGGCAA GCCGAAAGAC TTTGATGTGG CCACCAACGC AACCCCCGAG
CAGTTACGCC AACTGTTTCG CAACTGCCGT CTGATTGGTC GCCGTTTCCG TCTCGCGCAC
ATTATGTTTG GACGCGACAT CGTCGAAGTC GCCACTTTCC GTGGCCATCA TCAAGAGTCG
AGTCAGAGCC AAAATATCGC TGCACAATCC GAAGCGGGTA TGCTGCTACG TGATAACATG
TACGGCACGA TTGATGAAGA TGCCGAGCGC CGCGATTTCA CCATCAATGC CATGTATTAC
AACATTGCAG ACTACAGCAT CCACGACTAT GCCGGCGGCA TGGAAGATCT GGAAGATCGT
TTGGTGCGCC TGATTGGCGA TCCGGAAACG CGTTATCGTG AAGATCCGGT ACGCATGCTG
CGCGCGGTAC GTTTTGCGGT CAAACTCGAT TTTGATATCG AAGAAGATAC CGCGGCGCCG
ATTGAGCAAC TTGCGCCATT GCTGCGTGAC ATCCCTGCGG CTCGTCTCTA CGAAGAATCG
CTCAAAATGC TGCAAGCGGG TCATGGTTTA GAAACCTACC ACTTAATGCG TCAATACAAT
CTGTTCCAGC AACTTTTCCC AACTATAGCC GAGCATTTTA CTGCCGATCA CAGCTCAAAA
ACTGAGCAGA TGTTGGATTT GGTGCTGGAT GCGACCGACA TTCGGGTTGA AGAAGATCTG
CGCATCAATC CGGCCTTTAT GTTTGCCGCC ATGCTGTGGT ATCCGATGAT TGATCTCGCG
GATCGCTTAA TGGAATCGCT CGATCTCAAT GAGTTTGATG CCATTACCGA AGCCAGCAAC
CGCATCTTAG ATGAAGTGGT CAAGCGTATC GCTATTCCGC GCCGCCACAC CACTACAGTT
CGTGATATTT GGCAGTTGCA ACAGCGCTTA CCCCGTCGCA GTGGTAAAAG GGCCTTCCGT
CTACTTGAAC TGAACAAGTT CCGTGCAGGC TTTGATTTCC TCGAAATGCG TGGCGAAATT
GAAGGCGGTG AAACCAAACA ATTAGCGGAA TGGTGGGCCA CCTTCCAAAG CGCGGGACGC
AATATGCGCC AAGCCATGGT GGGTGATATC GGTAATGCAA CGGGCAGCAG CAAATCTGGC
GCTCGCCGCC GTAAACCATC CCGCAACAAA TCCAAGAGTA AATCCAGCGA ATGA
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| Protein sequence | MNNNDFEPSN TRTYPDLALT IIPRQEHPIS RQQISENALK VLYRLHGAGF EAFLVGGGVR
DLLLGGKPKD FDVATNATPE QLRQLFRNCR LIGRRFRLAH IMFGRDIVEV ATFRGHHQES
SQSQNIAAQS EAGMLLRDNM YGTIDEDAER RDFTINAMYY NIADYSIHDY AGGMEDLEDR
LVRLIGDPET RYREDPVRML RAVRFAVKLD FDIEEDTAAP IEQLAPLLRD IPAARLYEES
LKMLQAGHGL ETYHLMRQYN LFQQLFPTIA EHFTADHSSK TEQMLDLVLD ATDIRVEEDL
RINPAFMFAA MLWYPMIDLA DRLMESLDLN EFDAITEASN RILDEVVKRI AIPRRHTTTV
RDIWQLQQRL PRRSGKRAFR LLELNKFRAG FDFLEMRGEI EGGETKQLAE WWATFQSAGR
NMRQAMVGDI GNATGSSKSG ARRRKPSRNK SKSKSSE
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