Gene VC0395_A0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0118 
Symbol 
ID5135893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp104865 
End bp105533 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content47% 
IMG OID640531578 
Productputative carbonic anhydrase 
Protein accessionYP_001216083 
Protein GI147673800 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAA TTAAACAACT TTTTGAGAAC AACTCAAAAT GGTCTGAATC GATCAAAGCA 
GAAACTCCGG AATATTTTGC CAAACTCGCT AAAGGGCAAA ACCCGGATTT TTTGTGGATA 
GGATGTGCAG ACAGCCGAGT GCCAGCCGAA CGGCTCACTG GCCTTTACTC GGGGGAATTA 
TTTGTCCACC GTAACGTTGC CAATCAAGTT ATCCATACCG ATCTCAACTG TCTTTCTGTC 
GTTCAGTATG CGGTCGATGT GCTGCAAGTC AAACACATCA TTGTGTGCGG CCACTATGGG 
TGTGGTGGGG TTACTGCGGC GATCGATAAT CCACAACTTG GCTTAATCAA TAACTGGTTG 
CTGCATATTC GCGATTACTA CCTTAAACAT CGTGAATATC TCGATCAGAT GCCTGCCGAA 
GATCGCTCCG ATAAACTGGC AGAAATCAAT GTCGCCGAGC AAGTCTACAA CTTGGCTAAC 
TCAACCGTGT TACAGAATGC TTGGGAGCGT GGACAAGCAG TAGAAGTACA CGGTTTTGTC 
TACGGTATCG AGGATGGCCG ACTGGAATAT CTCGGTGTAC GCTGCGCGTC ACGCAGTGCA 
GTGGAAGATA ATTACCACAA AGCGTTAGAG AAGATACTCA ATCCGAATCA TCGCCTACTG 
TGTCGTTAA
 
Protein sequence
MPEIKQLFEN NSKWSESIKA ETPEYFAKLA KGQNPDFLWI GCADSRVPAE RLTGLYSGEL 
FVHRNVANQV IHTDLNCLSV VQYAVDVLQV KHIIVCGHYG CGGVTAAIDN PQLGLINNWL 
LHIRDYYLKH REYLDQMPAE DRSDKLAEIN VAEQVYNLAN STVLQNAWER GQAVEVHGFV 
YGIEDGRLEY LGVRCASRSA VEDNYHKALE KILNPNHRLL CR