Gene VC0395_A0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0106 
SymbolpetB 
ID5136626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp95597 
End bp96862 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content44% 
IMG OID640531566 
Productubiquinol--cytochrome c reductase, cytochrome B 
Protein accessionYP_001216071 
Protein GI147674128 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000729315 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCTC TACTTGATTG GGTAGAAAAA CGCCTACCTG CCATGAATGC GTACAAGAAA 
CACCTTTCAG AATACCCAAT GCCAAAGAAC TTTAACTTTT GGTATCTGTT TGGTTCGCTT
GCGATGTTGG TTTTGGTCAA CCAACTCCTG ACCGGTATTT GGTTAACCAT GAACTATGTG
CCATCGGGAG AGGGCGCTTT TGCTTCGATT GAATACATCA TGCGTGATGT GGAGTACGGC
TGGTTATTGC GTTATATGCA TTCAACCGGG GCTTCTGCAT TTTTCGTGGT AGTTTATCTG
CACATGTTCC GTGGCTTGAT TTATGGATCA TACCAAAAGC CTCGTGAGCT ATTGTGGATC
TTCGGTATGC TGATTTTCCT TGTGTTGATG GCAGAAGCCT TTATGGGCTA CTTGTTACCT
TGGGGACAGA TGTCTTACTG GGGCGCACAG GTAATCATTT CGCTGTTTGG TGCAATTCCG
GTTATTGGTG ATGATCTCAC GCTGTGGATC CGTGGTGACT ATGTCATTTC TGGTGCCACA
CTAAACCGTT TCTTTGCTTT GCATGTGATT GCGTTGCCAA TCGTATTACT GCTTTTGATC
GTGCTGCATA TTCTGGCTCT GCACGAAGTT GGCTCAAATA ACCCTGATGG TATTGAGACT
AAATTGCCAA AAGGTTCAAT GGGTGAAGGC TACGAATCAC AGTTTAAATT CCATGAGTAC
TACACTAAGA AGTACGACAT TATCGATTCG ATCCCATTCC ATCCTTATGG CACGGTGAAA
GATTTAATTG GTGTTGCGGG ATTCTTATTC TTGTTCTGCT ATGTGTTGTT CTTCAATCCA
GAGATGGGAG GATACTTCCT TGAGCCGCCC AACTTTGAAG CAGCTAACCC ACTGAAAACA
CCAGAACATA TTGCGCCTGT TTGGTACTTT ACGCCGTTTT ACGCCATCTT GCGTGCGGTT
CCAGATAAGC TGCTAGGGGT TATCGCGATG GGGGCATCGA TTGTTGTATT GTTCCTGTTA
CCTTGGCTGG ATCGTTGTAA GGTTCGTTCT TACCGTTATC GTAGCAAATT CCATTTATTC
AATATTGCCC AGTTCACTGT TAGCTTTATT GCCTTAGGGA TTTTAGGCGC GCTACCTGCA
ACTCCAACCT ACACACTGTT GGCTCAGATA TTTAGCTTGT GTTACTTCAT GTTCTTTGTG
TTGCTGTTCT TCTACAGCAA AAACGAAGCC ACTAAGCCAT TACCAACAAG GGTGACATAC
AAATGA
 
Protein sequence
MQALLDWVEK RLPAMNAYKK HLSEYPMPKN FNFWYLFGSL AMLVLVNQLL TGIWLTMNYV 
PSGEGAFASI EYIMRDVEYG WLLRYMHSTG ASAFFVVVYL HMFRGLIYGS YQKPRELLWI
FGMLIFLVLM AEAFMGYLLP WGQMSYWGAQ VIISLFGAIP VIGDDLTLWI RGDYVISGAT
LNRFFALHVI ALPIVLLLLI VLHILALHEV GSNNPDGIET KLPKGSMGEG YESQFKFHEY
YTKKYDIIDS IPFHPYGTVK DLIGVAGFLF LFCYVLFFNP EMGGYFLEPP NFEAANPLKT
PEHIAPVWYF TPFYAILRAV PDKLLGVIAM GASIVVLFLL PWLDRCKVRS YRYRSKFHLF
NIAQFTVSFI ALGILGALPA TPTYTLLAQI FSLCYFMFFV LLFFYSKNEA TKPLPTRVTY
K