| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0097 |
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| Symbol | trmD |
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| ID | 5135453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 87929 |
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| End bp | 88672 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531557 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001216062 |
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| Protein GI | 147675311 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000311515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGGTTG GCATCGTTAG CCTATTTCCT GAAATGTTCC GCAGCGTTAC CGATTTTGGA
GTAACAGGTC AGGCGGTTAA AAAAGGGTTG TTGTCAGTTG AAGCGTGGAA TCCTCGTGAT
TTCGCTCATG ACAAACGTCG CACTGTCGAT GATAAACCCT ACGGTGGCGG TCCCGGCATG
TTGATGATGG TGCAACCTTT GCGCGATGCC ATCCATGCTG CGAAACAAGC GTCACCGGGT
AAGACGAAAG TCATTTACCT CTCTCCGCAA GGTCGAAAAC TCGACCAACA AGGTGTGGAA
GAGCTGGCGC AAAACCAGAA TCTGATTCTG ATTTGCGGTC GCTATGAAGG GGTAGATGAA
CGCATTATTG AATCTGAAGT TGACGAAGAA TGGTCAATTG GTGATTTTGT AATGACGGGT
GGGGAACTCC CAGCCATGAC GTTGATTGAT TCTGTCTCGC GGTTCATTCC GGGAGTATTA
GGGGATTTCG CGTCAGCAGA AGAAGACTCT TTTGCCAATG GTTTGCTGGA TTGCCCTCAC
TACACGCGTC CCGAGGTATT GGACGGAAAA GAAGTGCCAG CGGTACTGAA ATCCGGCAAT
CATGAGGACA TTCGTCGTTG GCGACTCAAG CAGTCGCTTG GCCGTACCTG GCTTAGAAGA
CCGGAGCTCC TGGAAAACCT AGCTCTGACT GACGAACAGG AACAATTACT GACCGAGTAC
ATTAAAGAGA CTCGTCATCA GTAA
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| Protein sequence | MWVGIVSLFP EMFRSVTDFG VTGQAVKKGL LSVEAWNPRD FAHDKRRTVD DKPYGGGPGM
LMMVQPLRDA IHAAKQASPG KTKVIYLSPQ GRKLDQQGVE ELAQNQNLIL ICGRYEGVDE
RIIESEVDEE WSIGDFVMTG GELPAMTLID SVSRFIPGVL GDFASAEEDS FANGLLDCPH
YTRPEVLDGK EVPAVLKSGN HEDIRRWRLK QSLGRTWLRR PELLENLALT DEQEQLLTEY
IKETRHQ
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