| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0090 |
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| Symbol | gshA |
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| ID | 5137260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 80869 |
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| End bp | 82443 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531550 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_001216055 |
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| Protein GI | 147675148 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAAAT TTGCCGAGCG ACTACAAACA GTTGCAAACA AACCAGAAGT ATTTCAAAAG
TTTAGCCGTG GATTGGAGCG CGAATCGCTG CGTTACACGC CGGAAGGTGC TCTCACGCAA
ACGCCACACC CGAAAGCACT GGGAGCGGCA TTAACTCACC GTTGGATCAC CACAGATTTT
GCGGAGTCCT TGCTGGAGTT CATCACCCCT GTCTCGCATG AAGTCGATAC TCTGCTGGCG
CAGATGTCGG ATATTCACCA TTTCGCGCAG ACCAAGCTGG GCGATGAAAA ACTTTGGCCT
CTCTCCATGC CTTGCTACGT TGGCAGTGAA GAGGGGATAG TGCTGGCACA ATACGGTTCG
TCGAACACTG GAAAAATGAA AACCTTGTAC CGTGAAGGGC TCAAGCGTCG TTATGGCAGC
CTGATGCAGA TTATTTCCGG AGTACATTTC AATTTTTCAT TCCCAGAAAG TTTCTGGGAT
GCCTTGTTTG GTGAGCAAGA AGAGTCTGCT CGTCAAGCGA GTAAATCTGC GGCCTATTTT
GGTGTCATTC GTAATTACTA CCGTTTTGGT TGGCTGATCC CGTATCTGTT TGGCGCTTCC
CCCGCACTCT GCTCATCTTT TTTACAAGGT CGCAAAACCG ATCTGCCGTT CGAGTCCATT
GGTAAAACCT TGTATCTGCC TTATGCCACC TCGCTGCGTC TAAGCGATTT GGGCTACACC
AACAGCGCGC AAAGTGTGCT GCAAATTGGT TTCAATAGCA TAGAGCAGTA TCTGCAAGGG
TTGAATGAAG CGATCCGCAC CCCCTCAGCC GAGTTTGCCA AACTGGGTGT GAAAGTAGAG
GGAGAATATC GCCAGCTCAA TAGCAACGTA CTGCAAATTG AAAATGAGCT GTATGCGCCG
ATTCGTCCGA AACGTGTGAC ACAAAGTGGC GAGCGGCCTT CGCAAGCCCT AGCGCGTGCA
GGGGTGGAAT ATATTGAAGT GCGCTCGCTC GATGTGAACC CATTTAGCCC GATTGGAATT
AATGAAGATC AGGTTCGTTT CCTCGACCTA TTCTTAGCAT GGACAGCGCT GTCAGATTCT
GATCCTATGG ATGGCTGTGA ACTGGCTTGT TGGCGCGACA ACTGGCGTAA AGTGGTACTG
GAAGGTCGCA AGCCTGGCTT AGAACTGCAA ATTGGCTGCC ATGGTGAAGT GTTGACCTTG
CAAGCGTGGG CGAAGCGTGT GTTTGCCGAT CTGCGTGTGA TTGCTGAAAC TATGGATGCG
GCTCTCGGCG GCGATGCCTA CCAAGCGGTG TGTGCCAAAC TAGAGACTTG GATCGAAAAT
CCTGAGCTGA CGCTCTCGGC ACAAATCCTA GCAGAAATTA AACAGCACGG CGGCTTAGGT
AAAACAGGCT GCGCGTTAGG TAACGAGTAC CGAGCGGTCA ATTTACAGCA CCAATACCAG
TTCTACTCAC AAGATGAGAT GGAGCAGGAA GTGCGCCGCT CAACTCAAGC CCAAGCCGAC
ATTGAAGCGA AAGAGACGCT CAATTTTGAT GCTTACCTAA CGCAATATTT TGCCTACCTA
CAGGCGGTGA GTTAA
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| Protein sequence | MSKFAERLQT VANKPEVFQK FSRGLERESL RYTPEGALTQ TPHPKALGAA LTHRWITTDF
AESLLEFITP VSHEVDTLLA QMSDIHHFAQ TKLGDEKLWP LSMPCYVGSE EGIVLAQYGS
SNTGKMKTLY REGLKRRYGS LMQIISGVHF NFSFPESFWD ALFGEQEESA RQASKSAAYF
GVIRNYYRFG WLIPYLFGAS PALCSSFLQG RKTDLPFESI GKTLYLPYAT SLRLSDLGYT
NSAQSVLQIG FNSIEQYLQG LNEAIRTPSA EFAKLGVKVE GEYRQLNSNV LQIENELYAP
IRPKRVTQSG ERPSQALARA GVEYIEVRSL DVNPFSPIGI NEDQVRFLDL FLAWTALSDS
DPMDGCELAC WRDNWRKVVL EGRKPGLELQ IGCHGEVLTL QAWAKRVFAD LRVIAETMDA
ALGGDAYQAV CAKLETWIEN PELTLSAQIL AEIKQHGGLG KTGCALGNEY RAVNLQHQYQ
FYSQDEMEQE VRRSTQAQAD IEAKETLNFD AYLTQYFAYL QAVS
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