Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0054 |
Symbol | |
ID | 5137569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 49650 |
End bp | 50453 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531514 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_001216027 |
Protein GI | 147674526 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.849769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATT TTGAGTCGTT CATTCTGGCT TTAATTCAAG GCTTTACCGA GTTTTTACCG ATTTCTAGCT CCGCACACCT GATCTTGCCT TCGGCTATTT TAGGTTGGGA AGATCAAGGC TTGGCCTTTG ATGTGGCGGT ACACGTGGGA ACGCTCGCCG CGGTCGTGCT CTATTTTCGA AAAGAAGTGG TTTCGTTATT AAGTGCTTTT TTTGCTTCGA TTTTTAAAGG TGATCGCAGC AAAGAAGCCA AATTGGCGTG GTTGATCGTG CTGGCTACGA TTCCGGCTTG TCTGTTCGGT TTTGTGATGA AAGATATTGT TGAGCTCTAT TTGCGCAGCG CTTGGGTTAT CGCGACAACG ACTATCGTGT TTGGCCTTTT ACTCTGGTAT GTCGATAAAC ATGCAGAGCT CAAAGCCGAC GAATATCAAG CGGATTGGAA AAAAGCGCTG TTTATTGGTT TGGCGCAGGC CGTGGCTATT ATTCCTGGCA CTTCACGCTC TGGTGCAACC ATCACTGCTG CGCTCTATCT TGGCTTTACC CGTGAAGCGG CGGCGCGTTT TTCATTCTTA ATGTCGATTC CAATTATCGT ATTGGCGGGC AGTTATCTCG GATTGAAACT GGTGACCAGT GGTGAACCCG TACACAGCGG TTTCTTACTG ACAGGCATCA TCACTTCATT TATCAGTGCT TACATCTGTA TTCACTTCTT CCTGAAGCTC ATCTCTCGTA TGGGCATGAC CCCGTTTGTG ATTTATCGCT TAGTGCTTGG TGTAGGCTTA TTTGCGTTTT TATTAACTCA ATAA
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Protein sequence | MSYFESFILA LIQGFTEFLP ISSSAHLILP SAILGWEDQG LAFDVAVHVG TLAAVVLYFR KEVVSLLSAF FASIFKGDRS KEAKLAWLIV LATIPACLFG FVMKDIVELY LRSAWVIATT TIVFGLLLWY VDKHAELKAD EYQADWKKAL FIGLAQAVAI IPGTSRSGAT ITAALYLGFT REAAARFSFL MSIPIIVLAG SYLGLKLVTS GEPVHSGFLL TGIITSFISA YICIHFFLKL ISRMGMTPFV IYRLVLGVGL FAFLLTQ
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