Gene VC0395_A0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0054 
Symbol 
ID5137569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp49650 
End bp50453 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content46% 
IMG OID640531514 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001216027 
Protein GI147674526 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.849769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATT TTGAGTCGTT CATTCTGGCT TTAATTCAAG GCTTTACCGA GTTTTTACCG 
ATTTCTAGCT CCGCACACCT GATCTTGCCT TCGGCTATTT TAGGTTGGGA AGATCAAGGC
TTGGCCTTTG ATGTGGCGGT ACACGTGGGA ACGCTCGCCG CGGTCGTGCT CTATTTTCGA
AAAGAAGTGG TTTCGTTATT AAGTGCTTTT TTTGCTTCGA TTTTTAAAGG TGATCGCAGC
AAAGAAGCCA AATTGGCGTG GTTGATCGTG CTGGCTACGA TTCCGGCTTG TCTGTTCGGT
TTTGTGATGA AAGATATTGT TGAGCTCTAT TTGCGCAGCG CTTGGGTTAT CGCGACAACG
ACTATCGTGT TTGGCCTTTT ACTCTGGTAT GTCGATAAAC ATGCAGAGCT CAAAGCCGAC
GAATATCAAG CGGATTGGAA AAAAGCGCTG TTTATTGGTT TGGCGCAGGC CGTGGCTATT
ATTCCTGGCA CTTCACGCTC TGGTGCAACC ATCACTGCTG CGCTCTATCT TGGCTTTACC
CGTGAAGCGG CGGCGCGTTT TTCATTCTTA ATGTCGATTC CAATTATCGT ATTGGCGGGC
AGTTATCTCG GATTGAAACT GGTGACCAGT GGTGAACCCG TACACAGCGG TTTCTTACTG
ACAGGCATCA TCACTTCATT TATCAGTGCT TACATCTGTA TTCACTTCTT CCTGAAGCTC
ATCTCTCGTA TGGGCATGAC CCCGTTTGTG ATTTATCGCT TAGTGCTTGG TGTAGGCTTA
TTTGCGTTTT TATTAACTCA ATAA
 
Protein sequence
MSYFESFILA LIQGFTEFLP ISSSAHLILP SAILGWEDQG LAFDVAVHVG TLAAVVLYFR 
KEVVSLLSAF FASIFKGDRS KEAKLAWLIV LATIPACLFG FVMKDIVELY LRSAWVIATT
TIVFGLLLWY VDKHAELKAD EYQADWKKAL FIGLAQAVAI IPGTSRSGAT ITAALYLGFT
REAAARFSFL MSIPIIVLAG SYLGLKLVTS GEPVHSGFLL TGIITSFISA YICIHFFLKL
ISRMGMTPFV IYRLVLGVGL FAFLLTQ