Gene VC0395_A0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0050 
Symbol 
ID5135840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp47121 
End bp47933 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID640531510 
Productputative beta-ketoadipate enol-lactone hydrolase 
Protein accessionYP_001216023 
Protein GI147673630 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000263931 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGA TGCTGATTGA TGGCCAAAAA ATGGCTTACC TTGATGTCGG GGAAGGCGAA 
GTGTTGCTCT TTGGGCACAG CTATTTGTGG GATCACCAAA TGTGGGCTCC ACAAGTGGCT
GCGTTAAGTC AACGCTATCG TTGTATTGTG CCGGATTTTT GGGCGCATGG CGCTTCAGAG
GCCGCCCCTA CTGCGATGAG CAATCTCAAA GATTACGCTC AGCATATGTT GGCGCTGATG
GATCATCTGC AGATTGAGTA TTTCTCTGTG ATTGGCTTGT CGGTGGGAGG AATGTGGGGC
GCAGAGCTGG CCTTACTTGC GCCAAAGCGA GTTCAATCTC TGGTTATGAT GGATACTTTC
GTGGGTCTTG AACCGGAAGT GACCCACAAA AAATACTTTA CCATGTTAGA TACCATTGCT
CAGCTGCAAG CGGTGCCCGC TCCGATTGTG GAGGCGGTTG TTCCTATGTT TTTTGCATCT
AACACGTTGA AAAACGAGTT GCCTGTTGTG GCGCAATTTC GCTCGGCTCT GCAAGGTTTG
AGCGGCGAGC GTGCTGTTGA AGTGGCGCGT TTAGGGCGCA TGATTTTCGG GCGTCGTGAT
TTGATGGATG AGATCGAACA CTTAACTCTG CCTGTACTCA TCATGGTCGG CAGTGAAGAT
ACTCCTCGCC CAGCGTTAGA GTCTTACCTG ATGCAAGATA CGATTCGAGG CAGTCAACTT
GAAGTGATTG AAGGGGCGGG ACATATCAGT AGTTTGGAGC AGGCAGAATC GGTGACACAC
CACCTGCAAA CGTTCTTAGC AACCGTATAT TGA
 
Protein sequence
MNSMLIDGQK MAYLDVGEGE VLLFGHSYLW DHQMWAPQVA ALSQRYRCIV PDFWAHGASE 
AAPTAMSNLK DYAQHMLALM DHLQIEYFSV IGLSVGGMWG AELALLAPKR VQSLVMMDTF
VGLEPEVTHK KYFTMLDTIA QLQAVPAPIV EAVVPMFFAS NTLKNELPVV AQFRSALQGL
SGERAVEVAR LGRMIFGRRD LMDEIEHLTL PVLIMVGSED TPRPALESYL MQDTIRGSQL
EVIEGAGHIS SLEQAESVTH HLQTFLATVY