Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0049 |
Symbol | gcp |
ID | 5136340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 45948 |
End bp | 46967 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640531509 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | YP_001216022 |
Protein GI | 147675246 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000462165 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTA TTGGTATTGA AACCTCTTGT GACGAAACGG GTATCGCGAT TTACGATGAC GAAAAAGGAC TGCTGTCTCA TAAGCTTTAC AGTCAGGTAA AACTGCATGC CGATTATGGT GGTGTGGTGC CTGAGCTGGC TTCGCGTGAT CATGTAAAAA AAACCATCCC ACTCATCAAA GCGGCGATGG CAGAGGCAAA CGTGACGCCG CAAGATTTAG ACGGTGTGGC TTTTACCGCA GGCCCCGGTT TGGTTGGGGC GCTCTTGGTT GGCGCTACGA TTGGGCGCAG TTTAGCGTAC GCTTGGGATG TGCCAGCGGT GCCGGTTCAT CACATGGAAG GGCATCTTCT TGCTCCGATG CTGGAAGAGA ATCCGCCGCC GTTTCCGTTT GTCGCTTTGC TGGTATCGGG TGGTCACACC ATGCTGGTGG AAGTGAAAAA CATTGGTGAA TACCGCATTT TAGGTGAGTC TATCGATGAT GCGGCTGGCG AAGCCTTTGA TAAAACGGCC AAATTGATGG GATTGGATTA TCCAGGTGGC CCGTTATTGG CCAAGCTGGC GGAAAAAGGG ACTCCGGGAC GCTTTAAATT TCCCCGTCCT ATGACGGACA GACCGGGGCT CGATATGAGC TTTTCCGGTT TAAAAACTTT TACTGCCAAT ACCATTGCTG CAAATGGCGA CGATGAACAG ACCCGTGCGG ATATTGCTTA CGCCTTCCAA GAGGCCGTGT GTGACACTTT AGTCATTAAA TGTAAACGCG CATTGGAGGA GACAGGACTT AAGCGTGTGG TGATTGCGGG TGGTGTGAGT GCCAACAAGC AGTTGCGTGC TGATTTGGAA AAACTCGCGA AAAAAATCGG TGGCGAAGTG TATTACCCAC GTACTGAATT TTGTACCGAT AACGGAGCGA TGATCGCTTA TGCGGGCATG CAACGTTTGA AAAATGGTGA TGTGTGTGAA CTTGGCTTGC AAGCTCGCCC GCGTTGGCCG ATTGATCAGT TAACGTCAAT TCAGAAATAA
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Protein sequence | MRIIGIETSC DETGIAIYDD EKGLLSHKLY SQVKLHADYG GVVPELASRD HVKKTIPLIK AAMAEANVTP QDLDGVAFTA GPGLVGALLV GATIGRSLAY AWDVPAVPVH HMEGHLLAPM LEENPPPFPF VALLVSGGHT MLVEVKNIGE YRILGESIDD AAGEAFDKTA KLMGLDYPGG PLLAKLAEKG TPGRFKFPRP MTDRPGLDMS FSGLKTFTAN TIAANGDDEQ TRADIAYAFQ EAVCDTLVIK CKRALEETGL KRVVIAGGVS ANKQLRADLE KLAKKIGGEV YYPRTEFCTD NGAMIAYAGM QRLKNGDVCE LGLQARPRWP IDQLTSIQK
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