Gene VC0395_A0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0022 
Symboldns 
ID5135186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp16865 
End bp17560 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content50% 
IMG OID640531482 
Productextracellular deoxyribonuclease 
Protein accessionYP_001215996 
Protein GI147675504 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTT TTCGTTTCGT TACCACGCTT GCTGCTAGCT TACCTCTGCT CACCTTTGCC 
GCCCCCATCT CTTTTAGTCA TGCCAAAAAT GAAGCGGTGA AGATTTATCG TGATCATCCG
GTCTCTTTTT ACTGCGGCTG CGAGATTCGC TGGCAAGGCA AAAAAGGCAT CCCGGATCTG
GAGAGTTGCG GCTATCAAGT GCGTAAAAAT GAGAATCGTG CTTCGCGGAT TGAATGGGAA
CATGTGGTGC CGGCTTGGCA ATTTGGTCAT CAGTTGCAAT GCTGGCAACA AGGTGGCCGT
AAAAACTGCA CTCGTACTAG CCCTGAGTTC AATCAGATGG AAGCCGATCT GCACAACCTC
ACTCCGGCGA TTGGCGAAGT GAATGGCAAT CGATCCAACT TCAGTTTCAG TCAGTGGAAT
GGAATTGATG GCGTCACCTA CGGCCAGTGC GAAATGCAAG TAAACTTCAA AGAGCGCACA
GCCATGCCGC CAGAGCGTGC ACGCGGGGCG ATTGCGCGTA CATATCTGTA CATGAGTGAG
CAGTACGGTT TGCGACTTTC CAAAGCGCAA AACCAATTAA TGCAGGCGTG GAACAATCAG
TATCCGGTCA GCGAATGGGA ATGTGTGCGT GACCAAAAGA TCGAAAAAGT GCAAGGCAAC
TCGAACCGCT TTGTGCGTGA GCAATGCCCG AACTGA
 
Protein sequence
MMIFRFVTTL AASLPLLTFA APISFSHAKN EAVKIYRDHP VSFYCGCEIR WQGKKGIPDL 
ESCGYQVRKN ENRASRIEWE HVVPAWQFGH QLQCWQQGGR KNCTRTSPEF NQMEADLHNL
TPAIGEVNGN RSNFSFSQWN GIDGVTYGQC EMQVNFKERT AMPPERARGA IARTYLYMSE
QYGLRLSKAQ NQLMQAWNNQ YPVSEWECVR DQKIEKVQGN SNRFVREQCP N