| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0003 |
|---|
| Symbol | mutY |
|---|
| ID | 5135715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1199 |
|---|
| End bp | 2260 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640531463 |
|---|
| Product | A/G-specific adenine glycosylase |
|---|
| Protein accession | YP_001215977 |
|---|
| Protein GI | 147675529 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000019513 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCCTT TTGCACAGGC CATCCTTACT TGGTATGACG CCTACGGCCG CAAAAACCTG
CCGTGGCAAC AAAATAAAAA TGCGTATCGC GTTTGGTTAT CGGAAATCAT GTTACAGCAG
ACTCAAGTCG CGACCGTGAT CCCCTACTTT GAACGCTTTT TAGAGCGCTT CCCGACCGTA
CACGCCCTCG CGGCAGCGCC GCAAGATGAA GTGCTGCATT TCTGGACGGG GCTTGGCTAC
TACGCCAGAG CGCGCAATCT GCATAAAGCA GCGAAAATGG TTGTGAGTGA ATATAGCGGC
GAATTTCCCA CCGATTTAGA GCAGATGAAT GCGCTACCCG GTGTTGGCCG TTCCACCGCG
GCAGCCGTGC TCTCTTCTGT GTATAAAAAA CCACACGCCA TTTTGGATGG CAACGTGAAA
CGCACGTTAG CGCGCTGCTT TGCCGTTGAA GGTTGGCCGG GGCAAAAAAG TGTCGAAAAC
CAGCTTTGGC ATTATGCAGA AATGCACACG CCCAAAGTGG ATGTTGATAA ATACAACCAA
GCCATGATGG ATATGGGCGC AATGATCTGC ATTCGCAGTA AGCCCAAATG CAGCCTGTGC
CCAGTAGAAT CGTTTTGCCT TGCCAAGCAG CAAGGCAATC CCCAAGAGTA TCCGGGCAAG
AAACCGAAAA CAGATAAACC CGTCAAAGCC ACTTGGTTTG TCATGCTCTA TCACGACAAT
GCCGTCTGGC TTGAGCAGCG CCCGCAAAGC GGAATTTGGG GCGGTTTGTA CTGCTTCCCG
CAATCAGAGA TCGCCAATAT TCAAACCACC ATAGATCAGC GCGCCATCGG CGATAGCACA
ATAACATCGC AGAAAACCCT GATCGCATTT CGCCACACCT TTAGCCACTA CCATCTCGAT
ATTACGCCGA TTTTGCTGCA ATTAAGCCGC AAACCGGACA TCGTCATGGA AGGGAGCAAA
GGTCTTTGGT ATAACTTAAG TCAACCCGAT GAGATTGGTC TCGCGGCACC AGTGAAACAA
CTGTTGCACA GCTTACCTTT CGACATTGAT AGCCACATTT AA
|
|---|
| Protein sequence | MTPFAQAILT WYDAYGRKNL PWQQNKNAYR VWLSEIMLQQ TQVATVIPYF ERFLERFPTV
HALAAAPQDE VLHFWTGLGY YARARNLHKA AKMVVSEYSG EFPTDLEQMN ALPGVGRSTA
AAVLSSVYKK PHAILDGNVK RTLARCFAVE GWPGQKSVEN QLWHYAEMHT PKVDVDKYNQ
AMMDMGAMIC IRSKPKCSLC PVESFCLAKQ QGNPQEYPGK KPKTDKPVKA TWFVMLYHDN
AVWLEQRPQS GIWGGLYCFP QSEIANIQTT IDQRAIGDST ITSQKTLIAF RHTFSHYHLD
ITPILLQLSR KPDIVMEGSK GLWYNLSQPD EIGLAAPVKQ LLHSLPFDID SHI
|
|---|
| |