Gene VC0395_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_1080 
SymbolguaC 
ID5134395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp1046727 
End bp1047770 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content51% 
IMG OID640531402 
Productguanosine 5'-monophosphate oxidoreductase 
Protein accessionYP_001215916 
Protein GI147672335 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01305] guanosine monophosphate reductase, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG AACAAGAACT TAAGTTAGGT TTTAAAGATG TCCTGTTTCG CCCGAAACGT 
TCAACCCTGA AAAGCCGTTC TCAAGTAAAT TTAACCCGCG AGTTTACTTT CAAACATAGT
GGTCGTCAAT GGTCAGGCGT ACCTGTGATT GCCGCCAATA TGGACTCGGT AGGCAGTTTT
GCCATGGCTA AAGCCTTGGC TGAGCATGGT GTGATGACCG CAGTACACAA ACATTACACT
GTGGCTGATT GGGCTGAGTT TGTGAAAAGT GCCGACAAAG CGACGCTGAA CAATGTTATG
GTTTCAACCG GCACATCGGA AGCAGATTTC CAAAAAACCA AAGATGTGAT GGCACTGTCT
GATGAACTGA TCTTCATCTG TATCGATATC GCGAACGGCT ATTCTGAGCA CCTTGTCGAG
TACGTGCAAA GAGTGCGCGC TGCATTTCCT GACAAAGTGA TTTCTGCGGG TAACGTCGTA
ACAGGCGATA TGGTAGAAGA GCTTATCCTC GCGGGTGCCG ACATTGTTAA AGTAGGCATT
GGCCCAGGCT CTGTGTGTAC GACACGCGTA AAAACCGGTG TCGGTTACCC ACAACTGTCC
GCGATTATCG AATGTGCGGA TGCTGCGCAC GGTCTTGGTG GTCGCATCAT CGGTGACGGC
GGCTGTACGT GTCCGGGAGA TGTCGCGAAA GCCTTCGGCG GCGGCGCGGA TTTCGTGATG
CTTGGCGGTA TGCTGGCAGG TCATGAAGAA GCAGGCGGTG AACTCATCGT AAAAGATGGT
GAAACCTTCA TGAAATTTTA CGGCATGTCA TCGAAGAGCG CGATGGACAA GCATTCTGGC
GGTGTAGCAG GTTACCGTGC AGCCGAAGGA AAAACCGTAC TATTGCCATA CCGTGGCAGC
GTTCACGGCA CCATTCAAGA CATCCTCGGC GGCGTGCGCT CAACCTGTAC ATACGTAGGC
GCGGCTGAGC TTCGCGAGCT AACTAAGCGT ACAACATTTA TCCGAGTTCA AGAGCAAGAG
AACAACGTCT ACGGGCGTGA GTAA
 
Protein sequence
MRIEQELKLG FKDVLFRPKR STLKSRSQVN LTREFTFKHS GRQWSGVPVI AANMDSVGSF 
AMAKALAEHG VMTAVHKHYT VADWAEFVKS ADKATLNNVM VSTGTSEADF QKTKDVMALS
DELIFICIDI ANGYSEHLVE YVQRVRAAFP DKVISAGNVV TGDMVEELIL AGADIVKVGI
GPGSVCTTRV KTGVGYPQLS AIIECADAAH GLGGRIIGDG GCTCPGDVAK AFGGGADFVM
LGGMLAGHEE AGGELIVKDG ETFMKFYGMS SKSAMDKHSG GVAGYRAAEG KTVLLPYRGS
VHGTIQDILG GVRSTCTYVG AAELRELTKR TTFIRVQEQE NNVYGRE