Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0992 |
Symbol | |
ID | 5134666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 967607 |
End bp | 968176 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531314 |
Product | hypothetical protein |
Protein accession | YP_001215828 |
Protein GI | 147671751 |
COG category | [S] Function unknown |
COG ID | [COG4337] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 9.86598e-16 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACGTA TGACTCGTAC TCTATCCGTT TCCGCCCTGA TTCTGTGCGG CTTATTACCT TTCACGACTC AAGCTGCCGA TCTTGTCGTG AATAACAACA TCACTCATGA AGATGTGCTA AAAGCCCAAC AAGCATGGGG CGAAGCGCTG ATTAAAATCA GCGATACTTA TCAAAAACAA GGCATCAAAG CGGCAACTGA GCTTGCGAAC CAAGTGTTAG ATCAAGCCTA CGGCTACCAA CAAGGCGCAG TATTGTTTAA ACCGACCCTA GCCAGTGGCA AGCAAACCTT CCGCACCGAT ACAGAAGGTG CACTCTCTTA CTTTGTTGGC AACAATAAAA GCTACCCGCA AGATTCGGGC TTTGCCCTAA AAGGCTGGAA GGAATACCGT TTTGAAAATG CCGCGGTTTA CATTGATGGC GATCTTGCAC TCACTACAGG CAATGTCTTC CTAGTGAATG ATAAAGGGCA GGAAACCGTG GTAGACAAAA GCTGGGCTTT TAAGAAAGAT GAGCAAGGCC AACTGCGCAT TGTACTGCAC CACTCCTCGC TGCCTTATCA GGCGAAGTGA
|
Protein sequence | MQRMTRTLSV SALILCGLLP FTTQAADLVV NNNITHEDVL KAQQAWGEAL IKISDTYQKQ GIKAATELAN QVLDQAYGYQ QGAVLFKPTL ASGKQTFRTD TEGALSYFVG NNKSYPQDSG FALKGWKEYR FENAAVYIDG DLALTTGNVF LVNDKGQETV VDKSWAFKKD EQGQLRIVLH HSSLPYQAK
|
| |