| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0969 |
|---|
| Symbol | |
|---|
| ID | 5134369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 946349 |
|---|
| End bp | 946858 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640531291 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001215805 |
|---|
| Protein GI | 147672121 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4454] Uncharacterized copper-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA AAACACTGCT TGTGATAGCA CTGACTTTTA CTGTCACCAC AGCATTTGCG
CACTCGATGG ATCACTCAAA AATGGATCAC GGGGCGATGC CGATGGATCA TTCTCAAATG
ATGGGTATGG AAGGCATGTC TGATGTAGGC ATGCCCGCAC CGGGGGCGAA AGCAAACAAA
GTGGTGCACG TCATTTTGAG TGATGACATG AAGATCACAT TCAAAAAAGA CGTCACCATT
GAGCCTAACG ATGTGGTTCA GTTTGTGGTG ATGAACACAG GCAAAATCGA TCACGAATTT
TCGATTGGCT CCGCCGTGGA GCAACTGAAA CACCGTGAAA TGATGCGTCA AATGGGTAAC
CATGAACACG ACAGCGGCAG CACAGTCACC GTAAAACCCG GCAAAACCAA AGAGCTGCTG
TGGCATTTCC AAGGTGATAA CAAGGTGGAA TTTGCTTGTA ACATCCCCGG CCACGCTGAA
GCGGGAATGG TGAAAAGCAT CGAGTTATAA
|
|---|
| Protein sequence | MIKKTLLVIA LTFTVTTAFA HSMDHSKMDH GAMPMDHSQM MGMEGMSDVG MPAPGAKANK
VVHVILSDDM KITFKKDVTI EPNDVVQFVV MNTGKIDHEF SIGSAVEQLK HREMMRQMGN
HEHDSGSTVT VKPGKTKELL WHFQGDNKVE FACNIPGHAE AGMVKSIEL
|
|---|
| |