| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0941 |
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| Symbol | infC |
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| ID | 5134062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 917125 |
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| End bp | 917514 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531263 |
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| Product | initiation factor IF3 |
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| Protein accession | YP_001215777 |
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| Protein GI | 147672230 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
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| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000000800163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGATCTCG TTGAGATCAG CCCTAACGCC GAGCCACCAG TCTGTCGTGT GATGGACTAT
GGCAAGTTCC TCTTTGAGAA GAGCAAGGCT ACAAAAGAGC AGAAGAAGAA GCAAAAGCAG
ATCCAGATTA AGGAACTCAA ATTCCGTCCT GGGACTGATG TGGGAGATTA TCAGGTAAAA
CTACGCAACC TGATCCGTTT CCTAGAAGAA GGCAACAAAG TGAAAGTAAC TATTCGCTTC
CGTGGCCGAG AGATGGCTCA CCAAGACATC GGTGTAGACG TTTTGAATCG ACTGAAAGAG
GACACTGACG AATTCGCAGT GGTTGAGTCT TTCCCGACCA AAATTGAAGC ACGCCAGATG
ATCATGGTGT TAGCCCCTAA AAAGAAGTAA
|
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| Protein sequence | MDLVEISPNA EPPVCRVMDY GKFLFEKSKA TKEQKKKQKQ IQIKELKFRP GTDVGDYQVK
LRNLIRFLEE GNKVKVTIRF RGREMAHQDI GVDVLNRLKE DTDEFAVVES FPTKIEARQM
IMVLAPKKK
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