Gene VC0395_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0798 
Symbol 
ID5134508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp835907 
End bp836599 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content40% 
IMG OID640531120 
Productputative acetyltransferase 
Protein accessionYP_001215634 
Protein GI147672103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAG AAGAGTTTCA AGAATCGGAT TTTGACCTGC TTATAAAATG GATTGACTCA 
GATGAGTTGA ACTATTTATG GGGTTGCCCT GCGTATGTTT TCCCGCTGAC TTATGAACAG
ATCCATTCCC ACTGTAGCAA AGCGGAAGTA TTTCCCTATC TGCTAAAAGT GAAAGGTAGA
CATGCCGGGT TTGTTGAGTT GTACAAAGTC ACCGATGAGC AATATCGGAT TTGCCGTGTC
TTTATTTCAA ATGCTTATCG TGGGCAAGGG CTATCAAAAT CGATGTTGAT GTTATTAATC
GATAAAGCCC GATTAGATTT TTCTGCAACC AAGCTTAGCT TAGGCGTTTT TGAACAGAAC
ACAGTTGCTA GAAAATGCTA TGAGTCATTA GGTTTTGAAG TGGTTATGGT TGTTGTGATT
GAGTTTGGCG GTATGCGTTG TCAGCCCCTT AGGCGGGCGT TATGTTTTTT ATCACGTTTT
GGGGCTATAA TCGGCCTAAC CTTTATTGAT AGTAGGTGTG ATATGAATCG AAAAGTTGAA
GCTTACGGCG TTGATGCTGT TGAAAGACCG AAAATTAAGG CTAGTAAAAA GCTTGATTTG
ACTGGTGATG CTGGTCGTCA AATTGTGAAG TCTGAAACTA AACTTGCTTT GCGTACTCAT
CAGAAGACAT TCACTAAATT GGCTGATATG TAA
 
Protein sequence
MNLEEFQESD FDLLIKWIDS DELNYLWGCP AYVFPLTYEQ IHSHCSKAEV FPYLLKVKGR 
HAGFVELYKV TDEQYRICRV FISNAYRGQG LSKSMLMLLI DKARLDFSAT KLSLGVFEQN
TVARKCYESL GFEVVMVVVI EFGGMRCQPL RRALCFLSRF GAIIGLTFID SRCDMNRKVE
AYGVDAVERP KIKASKKLDL TGDAGRQIVK SETKLALRTH QKTFTKLADM