| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0686 |
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| Symbol | glpA |
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| ID | 5134952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 749617 |
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| End bp | 751260 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531008 |
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| Product | sn-glycerol-3-phosphate dehydrogenase subunit A |
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| Protein accession | YP_001215525 |
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| Protein GI | 147671420 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCTT ATCAAAGAAT GGAAACCGAC GTGGTCATCA TTGGCGGCGG CGCAACAGGA
ACCGGAATCT TGCGCGACTG CGCATTGCGC GGATTGCGCT GTATTCTGGT TGAAAAAGAT
GACATTGCCG CGGGCACCAC AGGTCGCAAT CATGGTTTGC TGCACTCCGG CGCTCGTTAC
GCGGTCACTG ACTCTGAGTC GGCACGCGAG TGTATCCAAG AGAACAAAAT TCTGAAATCC
ATCGCGCGCC ACTGCGTTGA AGCCACCGAT GGTTTGTTTA TCACTCTGCC AGAAGATGAT
TTAGGCTTTC AGGAGTCGTT TATTCACGCC TGTAGTGATG CAGGGATTGA AACGCAGCGC
TTAACACCTA AAGAAGCCTT GTTACTTGAG CCGAATGTCA ACCCTGCTTT GATTGGCGCG
GTGAAAGTGC CTGACGGTAC GCTCGACCCT TTTCGCCTGT GTGCGGCCAA TGTGCTGGAT
GCCAAAGAAC ATGGCGCGCG AATGTTTAAC CGCACTATTG TGACCCAGTT GATCCGTGAG
GGAGATACCG TGCTTGGCGT GCGTTGCCAG CATTTAGGCA GTGGCGCTAA GTTTGATATT
TTCGCTCAAC AAGTGATTAA TGCAGCAGGC ATTTGGGGAC AAAACATCTG CGAATATGCG
GATCTCAACA TCAAGATGTT CCCCGCCAAA GGCTCGCTGC TGATCTTGGA TTACCGCATT
AATAATCTGG TGATCAACCG CTGCCGTAAG CCATCGGATG CGGACATTTT GGTTCCCGGC
GATACCATTT CGCTGATTGG CACCACTTCC GAGCACATTG ATTATGACCA GATCGATAAT
CTGCATGTCA CTGAACGAGA AGTGGATATT TTGCTCGCCG AGGGCGCCAA ACTTGCCCCC
ATTATGGCCA ACACTCGCGT ATTGCGCGCT TATGCGGGCG TTCGCCCACT GGTCGCAGTG
GATGATGATG GCAGTGGCCG TAATATCAGT CGTGGCATTG TTTTGCTGGA TCACGAGCAG
CGTGACGGCT TGAAAGGCTT CACCACCATT ACCGGTGGCA AACTGATGAC TTACCGTTTG
ATGGCCGAGT GGGCCACCGA TCTGGTCGCC AAGAAGCTTG GCAATACTCA AAGCTGCCAA
ACGCATCTGC GCCCTTTACC GGGCTCTCAA GAAGCGCCAA AAACGCTCAA AAAAACCGCC
AGTATTGCCA AACCGGTTTA TGAATCTGCC ATTTATCGTC ACGGTGAACG TGCCGCGAGC
TTTTTAGCCG ACGATGCAAA AAGCCAAGCG GTGATCTGCG AGTGCGAAAT GGTCACCGCC
GGTGAAATCG AATACGCCAT CAAGCAGTTG GATGTGAATA ATTTGGTCGA CCTACGACGC
CGTACTCGTT TGGGTATGGG GCCTTGTCAG GGTGAGCTGT GCAGCTATCG CGCAGCCAGT
CTGTTTAGTG AATACGGGCA AGTTTCGGGT TGCCAATCGA GCCATTTGTT GGTCGATTTT
CTGGAAGAGC GCTGGAAAGG CATCAAACCG ATTTTCTGGG GCGATGCGCT ACGCGAAGCA
GAATTTAGCT ACTGGATTTA CGAAGGCTTG CTCGGTGCAA GCGATTTACC TTCCTTCGAC
TCAGCCACGG AGAAACAACA ATGA
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| Protein sequence | MTAYQRMETD VVIIGGGATG TGILRDCALR GLRCILVEKD DIAAGTTGRN HGLLHSGARY
AVTDSESARE CIQENKILKS IARHCVEATD GLFITLPEDD LGFQESFIHA CSDAGIETQR
LTPKEALLLE PNVNPALIGA VKVPDGTLDP FRLCAANVLD AKEHGARMFN RTIVTQLIRE
GDTVLGVRCQ HLGSGAKFDI FAQQVINAAG IWGQNICEYA DLNIKMFPAK GSLLILDYRI
NNLVINRCRK PSDADILVPG DTISLIGTTS EHIDYDQIDN LHVTEREVDI LLAEGAKLAP
IMANTRVLRA YAGVRPLVAV DDDGSGRNIS RGIVLLDHEQ RDGLKGFTTI TGGKLMTYRL
MAEWATDLVA KKLGNTQSCQ THLRPLPGSQ EAPKTLKKTA SIAKPVYESA IYRHGERAAS
FLADDAKSQA VICECEMVTA GEIEYAIKQL DVNNLVDLRR RTRLGMGPCQ GELCSYRAAS
LFSEYGQVSG CQSSHLLVDF LEERWKGIKP IFWGDALREA EFSYWIYEGL LGASDLPSFD
SATEKQQ
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