Gene VC0395_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0676 
Symbol 
ID5134740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp744320 
End bp744970 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content50% 
IMG OID640530998 
Productmultidrug resistance protein A 
Protein accessionYP_001215515 
Protein GI147672056 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.545698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTC AACTCTCCCC ACTCGAAGCC CGTGTAATTG GCTGTTTAAT TGAAAAAGAA 
GTCACCACGC CCGATCACTA TCCACTGACA CTCAATAGCT TAACCACCGC TTGTAACCAA
AAAAGCAATC GCGAACCGGT ACTCAACTTG AGTGAAGCGG AAGTGCAAGA CACGGTGGAA
GGGTTAATCG CTCGTCGCCT TGTAAGCGAT GAAAGCAGCT TTAATAGCCG TACCAGCAAA
TACCAACACC GCTTCTGTAA TACAGAGTTT GGCGATCTCA AACTCAATCA ACAAGAACTC
GGACTCATCT GCTGCTTATT GCTGCGCGGT GCGCAAACCC CCGGAGAGCT GCGCACGCGA
ACCAATCGAC TCTGTACATT TACCGATGTG AAAGAGACTG AAGCGGTACT TGAGCGCTTA
GCGAATCGTG ATTCAGGTGC GCTGGTGGTG AAATTGCCGC GTGAGCCGGG TAAGCGTGAG
TCCCGCTACC ATCATCTGTT TTGCGGTGAA GTGGATATGG CGGCTTTTGC CACGAGCTCA
GACAATGAAG CGAACGCCTC TTCTCAATAC GCTGAGCTAG AACAAGAAGT GGCAGCACTG
CGTGAAGAAG TGGCCGAGTT GCGCGCACTG ATTGAACGAC ATTTAGGCTA A
 
Protein sequence
MNIQLSPLEA RVIGCLIEKE VTTPDHYPLT LNSLTTACNQ KSNREPVLNL SEAEVQDTVE 
GLIARRLVSD ESSFNSRTSK YQHRFCNTEF GDLKLNQQEL GLICCLLLRG AQTPGELRTR
TNRLCTFTDV KETEAVLERL ANRDSGALVV KLPREPGKRE SRYHHLFCGE VDMAAFATSS
DNEANASSQY AELEQEVAAL REEVAELRAL IERHLG