| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0657 |
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| Symbol | |
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| ID | 5134073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 722565 |
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| End bp | 724742 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530979 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215496 |
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| Protein GI | 147672452 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCTGCG CTGTGCCGAA AATTAACCAA CTGCGCCTGT ATTGGGCAAA TAAAACTGTT
AACTACAGTG TCTTGATCTT ATTGACTTTA CTGGGTGTGG TGATCCCCGC TTGGTATTAT
CAGCTCAACA CTTGGATCAC CCCTTTGATT CTCGGGGTGA TTGCCGCGGC ACTCGCCGAT
CGAGATGACC GCTTTAGTGG CCGTTTGAAA TCCATCATTC TCACTTTGAT CTGCTTTGCG
ATTGCCGCTT TCTCGATTGA GATTCTGTTT CAAACCCCGT GGCTGTTTGC GCTTGGTCTA
TTCACCTCAA GTTTTGGTTT TATCATGCTC GGCGCTATGG GGGCACGCTA CGCCAGCATC
GCGTTTGCTT CTCTACTGGT TGCCGTGTAC ACCATGCTCG GTGCCCATCA AAGCACGAAT
ATCTGGTTTC AGCCGTTACT TTTACTCAGC GGCAGCGCTT GGTACTACTT GATGTCGATG
CTGTGGCATG CCTTTTGGCC AATGCAGCCC GTACAACAAA ACCTCGCTAA CGTGTTTCTG
CAACTGGCCA ATTATTTAGA GGCGAAATCC ACCCTTTTCC ACCCGGTTTC CAACATGATC
CCGCAGCCAC ACCGGATCAT TGAGGCCAAT CTTAACGCCG CGACAGTCAA TGCGTTAAAC
CAGTGCAAGG CGGTGTTTCT GACCCGCTCC AAACGGGGGC ATGTGGACAG CGCCAGCGAT
CGCTTTTTAA ACATCTATTT TCTGGCGCAA GACATTCACG AACGAGTGAG CTCCAGCCAT
TACCGTTACC AAGAGCTAGC CGATCACTTT GGCCGCTCAG ACATTCTGTT CCGCTTTAAA
TATTTATTGG AGACGCAAGC GAAAGCGTGC CGCGATATCG CTCAATCGAT TCGTCTTGGG
CACAGTTACC AGCACGACTC TGCTTCGATT GTCGCGCTGG ATGAACTGCA GTTATCACTC
AGCTATCTTC GCCAACAAGA GAGACGAGAT TGGAAAAGTC TTTTGGGTCA ATTAGGCTAT
TTATTCAATA ACTTAGCGAC CGTAGAAAAA CAGCTCAATA ACGTCAGTAA CCCGGATGTG
GCCAAACCCG AAGAAGGGGT ACTGGATGAC ACTGAAGCGC ACACCTTAGG CAGCATGTGG
CAACGTATTC GCGCCAATCT CAATAAAGAT TCGCTGTTAT TTCGCCATGC GCTGCGCTTG
TCCATCACGC TCACCTTGGG CTATGCGATC ATCCAAGGGT TCGGCATTGA GCGCGGTTAC
TGGATTTTGC TCACCACCCT GTTTGTTTGC CAGCCAAACT ACGCCGCAAC CAAGCAAAAA
CTCACCGCGC GAATCATAGG CACCTTGGCC GGCTTGCTGA TTGGCGTGCC GCTACTCACC
TTCTTCCCAT CACAAGAGAG CCAATTGGTG TTTATTGTCT TCTCCGGTGT GATGTTTTTT
GCGTTTCGCC TCAACAACTA CGGCTACGCG ACCGGTTTTA TCACCTTATT GGTGCTGTTT
TGTTTCAATC AGTTAGGTGA AGGCTATGCG GTGGTATTAC CAAGATTGGC AGATACCCTC
ATTGGCTGCG CCTTGGCGGT AGCGGCCGTG GTGCTCATTC TGCCAGACTG GCAATCGAAA
CGGCTGCATA AAGTGATGGC GGAAGCGATT GATGCCAATA AGCAGTACTT GGCGCAGATC
ATTGGTCAAT ATCGGATTGG TAAAAAAGAC AGCTTGAGTT ACCGGATTGC GCGGCGTCAT
GCCCACAACC AAGATGCCGC GCTTTCTGCC GCGGTCACCA ATATGCTGGC GGAGCCGGGG
CGTTATCGTG CGGCGGCCGA TGAGAGCTTT CGTTTCCTGA CCCTTAACCA CGCGCTGCTC
AGTTATATCT CGGCGCTTGG AGCACATCGA ACCCGGCTGG ATGATGAAAC CGTGCATCAG
TTGGTACTCG ATTCACATCG CGTGATCCAT CAGCATCTCG ACTTGCTGCA TCAACAGTTG
TCCAACCACT GTGAAGAGTG TGATACCAGC GGTATTGATA GCTCAGGGCT AGAGAAACGT
CTTGCTGAGT GGCGTGAGGA TGATGAAGGC TCGGCGCGCA TGGTACTGCA ACAGCTGCAC
TTGATTTATC GCATGCTGCC TGAGCTGCAC ATGCTCGCCA GCAAGTTTGC TGTCAAGGTC
GATTCTCAAT CCGACTGA
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| Protein sequence | MCCAVPKINQ LRLYWANKTV NYSVLILLTL LGVVIPAWYY QLNTWITPLI LGVIAAALAD
RDDRFSGRLK SIILTLICFA IAAFSIEILF QTPWLFALGL FTSSFGFIML GAMGARYASI
AFASLLVAVY TMLGAHQSTN IWFQPLLLLS GSAWYYLMSM LWHAFWPMQP VQQNLANVFL
QLANYLEAKS TLFHPVSNMI PQPHRIIEAN LNAATVNALN QCKAVFLTRS KRGHVDSASD
RFLNIYFLAQ DIHERVSSSH YRYQELADHF GRSDILFRFK YLLETQAKAC RDIAQSIRLG
HSYQHDSASI VALDELQLSL SYLRQQERRD WKSLLGQLGY LFNNLATVEK QLNNVSNPDV
AKPEEGVLDD TEAHTLGSMW QRIRANLNKD SLLFRHALRL SITLTLGYAI IQGFGIERGY
WILLTTLFVC QPNYAATKQK LTARIIGTLA GLLIGVPLLT FFPSQESQLV FIVFSGVMFF
AFRLNNYGYA TGFITLLVLF CFNQLGEGYA VVLPRLADTL IGCALAVAAV VLILPDWQSK
RLHKVMAEAI DANKQYLAQI IGQYRIGKKD SLSYRIARRH AHNQDAALSA AVTNMLAEPG
RYRAAADESF RFLTLNHALL SYISALGAHR TRLDDETVHQ LVLDSHRVIH QHLDLLHQQL
SNHCEECDTS GIDSSGLEKR LAEWREDDEG SARMVLQQLH LIYRMLPELH MLASKFAVKV
DSQSD
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