Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0619 |
Symbol | napC |
ID | 5135059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 676093 |
End bp | 676668 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530941 |
Product | periplasmic nitrate reductase, cytochrome c-type protein |
Protein accession | YP_001215458 |
Protein GI | 147672008 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTTC TAAAAGCGTT TTGGCTTCGT CTATCGAGCC CAAGTAAAGC CGCCGTCGGT GTGGTTCTGC TGATGGGTTT TGTCGGCGGC CTGTTATTTT GGGGCGCCTT CAATACAGGA ATGGAAGCGA CCAACAGCGA AGAGTTTTGC TCGGGCTGTC ACGCGCCGAT TGTGGCCGAA ATCCAAGAGA CGATTCACTA TTCAAACCGT TCTGGGGTTC GCGCCATCTG TTCTGACTGC CATGTCCCCC ATGAATGGAC GGATAAAATT GTGCGTAAAG TGCAAGCGTC CAAGGAATTG GTGGCACACT TTATCGGCAC GATTGATACG CCAGAGAAGT TCCAAGCACG CCGCGCACAC TTAGCTGAAC GCGAATGGGC ACGCTTGAAA AAGAACGATT CGTTGGAATG TCGAAACTGT CACCAGTTCA ACTACATGGA TTTCTCTGAG CAGAGTAGCC GAGCAGCGAA GCAACACTCG ACCGCACTCG CCTCTGGTGA AAAAACCTGT GTGGATTGCC ATAAAGGCAT CGCACACAAT CTACCCGACA TGCATGGTGT TGAAGGCTGG CAATAA
|
Protein sequence | MKFLKAFWLR LSSPSKAAVG VVLLMGFVGG LLFWGAFNTG MEATNSEEFC SGCHAPIVAE IQETIHYSNR SGVRAICSDC HVPHEWTDKI VRKVQASKEL VAHFIGTIDT PEKFQARRAH LAEREWARLK KNDSLECRNC HQFNYMDFSE QSSRAAKQHS TALASGEKTC VDCHKGIAHN LPDMHGVEGW Q
|
| |