| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0580 |
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| Symbol | |
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| ID | 5134290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 631096 |
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| End bp | 632037 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530901 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215418 |
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| Protein GI | 147672145 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAC TCAATGATTT GAATTTGTTT GTCGAAACGG CGCGCCAAGG CAGTTTTTCT
AAAGCGGCCA ACAGCCTATC ACTCACGACC GCCGCCGTGA GCGCTGCGAT CCGCCGCTTG
GAAGAGCAAG TGCAATTTCC GCTGTTTGTG CGCTCAACGC GACATATTCG TTTAACTCAT
GAGGGCGAAA TCTTTCTTGC CAAAACCCAA ACCGCGCTGG CCACCTTGCA AGAGGGTTTG
GATCAGATCG CTTGTGCGCG TGGCCAGTTG GCTGGCCAAC TGCACATCAG CGCGCCTTCA
GATTTGGGGC GTAATTTGCT GCTCGACTGG ATTGATGAAT TTATCGCGCT GCACCCGAAT
GTCACGGTGA AACTGGATCT CTCTGATCGT CTGACGGATA TGTACGCCAA TCCGGTCGAT
ATCGCGATTC GTTATGGTCA GCCCGCCGAT TCCAATTTAG TCGCCATGTT GCTGTGCGAT
TCTAACGAGC GCGTATTGTG TGCTTCGCCA GAGTATTTGG CCGCTCACCC GCCCATTCTG
CATCCTGACG ATTTACAGCA TCACAACTGT CTGTGCTTTA TGCTGGCCGA TACGCTACAC
AACAAATGGA TTTTGAGCCG CAATGGCGAA ACGCACAGTG TGGTGGTGCA AGGCAACCCT
GCCTGTAATG ATGGCGAAGT AGTACACAGA TTGGCGGTAA AAGGCAAAGG CATTGCCAAT
AAATCGCTGA TGGACATCAG TCAGGACATT ATTGATGGGC GTTTAGTGCG GATTTTGCCG
GAATGGGAAA GCGGCCCTGT ACCCATTTAT ATGGTGTGTG CCGATCGACG TTTGATCACT
CCAACCATTC GCGCTTTTCA GGAATTCATT CGTGAAAAAG GCTGCCAACA ACGACGTGCG
GTGCTGACAG CCATTCAAGA GCGAGAGCAA AATCCTCGTT AG
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| Protein sequence | MKALNDLNLF VETARQGSFS KAANSLSLTT AAVSAAIRRL EEQVQFPLFV RSTRHIRLTH
EGEIFLAKTQ TALATLQEGL DQIACARGQL AGQLHISAPS DLGRNLLLDW IDEFIALHPN
VTVKLDLSDR LTDMYANPVD IAIRYGQPAD SNLVAMLLCD SNERVLCASP EYLAAHPPIL
HPDDLQHHNC LCFMLADTLH NKWILSRNGE THSVVVQGNP ACNDGEVVHR LAVKGKGIAN
KSLMDISQDI IDGRLVRILP EWESGPVPIY MVCADRRLIT PTIRAFQEFI REKGCQQRRA
VLTAIQEREQ NPR
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