Gene VC0395_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0562 
Symbol 
ID5134878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp615363 
End bp616193 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content51% 
IMG OID640530884 
Productputative thiosulfate sulfurtransferase SseA 
Protein accessionYP_001215401 
Protein GI147672034 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCC CACTCGTCAC GGCGCAATGG CTGCAACAAC ATCTGCACGA CCCCAATTTG 
GTGATCCTCG ATAGCAGCAT CGAGTTTCAA ATTCCAACCG AGTCTGAAAA AGATTGGATC
AACAAAATTC CCAACGCGCA GCGCTTTGAT TACGACAAAG AGTTTTGCGA CCCTGATTCG
CCCTTGCCGC ACATGATGCC TTCTGAGCAG CGCTTTAACA CTCTCGCTCG CGAACTGGGT
ATCAACCAAG ATTCCATTAT TGTGGTGTAC GACAACAGCG GCACTTTTGC TTCTCCCCGA
GCATGGTGGA TGTTCAAAGC CATGGGACAC CACAAGGTGT ATATCCTCAA TGGCGGATTA
ACCGAATGGA AAGCTCAGGG TTACAACGTC ACTCAAAACT ATCGTGAACC CACAACAAAA
GGGAACTTTG ACGGCAAACT CAACCCACAA GCCTTTGTTG ATGCGAGTTA TGTTCTCAAA
CAGATCGATA ATCCACATAG CCAAACCATT GATGCTCGCG GATTAGCGCG CTTTTTCGGT
GAAGTGCCAG AACCTCGCCC CGGCGTGCGC AGTGGGCATA TTCCCGGCTC ATCCTGCTTG
CCTTTTGCAG AGCTCATCAC TGGTCACAAG CTAAAAGAGC AAGCCGAGTT ACGCCCGCTA
CTGACTCATA TGTTGCCCGA GACAGCACAA GAATATCTGT TTAGCTGCGG CTCAGGCGTG
ACCGCATGTA TTGTGCTGCT CGCGGCGTAT GTGTGCGGTT ATCAAAACCT CTCGGTTTAC
GATGGTTCGT GGACAGAATG GGGACAACGG CAAGATCTGC CGATTGAGTA A
 
Protein sequence
MTSPLVTAQW LQQHLHDPNL VILDSSIEFQ IPTESEKDWI NKIPNAQRFD YDKEFCDPDS 
PLPHMMPSEQ RFNTLARELG INQDSIIVVY DNSGTFASPR AWWMFKAMGH HKVYILNGGL
TEWKAQGYNV TQNYREPTTK GNFDGKLNPQ AFVDASYVLK QIDNPHSQTI DARGLARFFG
EVPEPRPGVR SGHIPGSSCL PFAELITGHK LKEQAELRPL LTHMLPETAQ EYLFSCGSGV
TACIVLLAAY VCGYQNLSVY DGSWTEWGQR QDLPIE