Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0562 |
Symbol | |
ID | 5134878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 615363 |
End bp | 616193 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530884 |
Product | putative thiosulfate sulfurtransferase SseA |
Protein accession | YP_001215401 |
Protein GI | 147672034 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCCC CACTCGTCAC GGCGCAATGG CTGCAACAAC ATCTGCACGA CCCCAATTTG GTGATCCTCG ATAGCAGCAT CGAGTTTCAA ATTCCAACCG AGTCTGAAAA AGATTGGATC AACAAAATTC CCAACGCGCA GCGCTTTGAT TACGACAAAG AGTTTTGCGA CCCTGATTCG CCCTTGCCGC ACATGATGCC TTCTGAGCAG CGCTTTAACA CTCTCGCTCG CGAACTGGGT ATCAACCAAG ATTCCATTAT TGTGGTGTAC GACAACAGCG GCACTTTTGC TTCTCCCCGA GCATGGTGGA TGTTCAAAGC CATGGGACAC CACAAGGTGT ATATCCTCAA TGGCGGATTA ACCGAATGGA AAGCTCAGGG TTACAACGTC ACTCAAAACT ATCGTGAACC CACAACAAAA GGGAACTTTG ACGGCAAACT CAACCCACAA GCCTTTGTTG ATGCGAGTTA TGTTCTCAAA CAGATCGATA ATCCACATAG CCAAACCATT GATGCTCGCG GATTAGCGCG CTTTTTCGGT GAAGTGCCAG AACCTCGCCC CGGCGTGCGC AGTGGGCATA TTCCCGGCTC ATCCTGCTTG CCTTTTGCAG AGCTCATCAC TGGTCACAAG CTAAAAGAGC AAGCCGAGTT ACGCCCGCTA CTGACTCATA TGTTGCCCGA GACAGCACAA GAATATCTGT TTAGCTGCGG CTCAGGCGTG ACCGCATGTA TTGTGCTGCT CGCGGCGTAT GTGTGCGGTT ATCAAAACCT CTCGGTTTAC GATGGTTCGT GGACAGAATG GGGACAACGG CAAGATCTGC CGATTGAGTA A
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Protein sequence | MTSPLVTAQW LQQHLHDPNL VILDSSIEFQ IPTESEKDWI NKIPNAQRFD YDKEFCDPDS PLPHMMPSEQ RFNTLARELG INQDSIIVVY DNSGTFASPR AWWMFKAMGH HKVYILNGGL TEWKAQGYNV TQNYREPTTK GNFDGKLNPQ AFVDASYVLK QIDNPHSQTI DARGLARFFG EVPEPRPGVR SGHIPGSSCL PFAELITGHK LKEQAELRPL LTHMLPETAQ EYLFSCGSGV TACIVLLAAY VCGYQNLSVY DGSWTEWGQR QDLPIE
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