Gene VC0395_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0556 
Symbolfhs 
ID5134660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp608702 
End bp610450 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content52% 
IMG OID640530878 
Productformate--tetrahydrofolate ligase 
Protein accessionYP_001215395 
Protein GI229259761 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2759] Formyltetrahydrofolate synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.124626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCAG ATATTGAAAT TTGCCGCGCT ACACCATTAG CGCCTATCGA CACCATTGCT 
CAAAAAGCGG GATTGCACGC GAATGAGTAC GAAAGCCACG GCCAGCATAA AGCCAAAGTG
TCACTGCATT GTCTAGAGCG ATTGGCCAAC AAGCCCAAAG GTAAATTCAT TCTGGTCACT
GCGATTACCC CAACACCACT GGGTGAAGGT AAAACCGTTA CCACGATTGG TTTAGCACAA
GGGTTGGCCA AACTTAATCA CTCGGTCATG GCGTGCATTC GTCAGCCTTC GATGGGGCCG
ATTTTTGGGG TAAAAGGGGG CGCTGCGGGT GGTGGTTATT CACAAGTTGC ACCTATGGAA
GAGCTCAATC TGCATTTAAC CGGTGATATT CATGCCGTAA CGGCGGCGCA CAACCTTGCG
GCAGCTGCGA TTGATGCGCG AATTTATCAC GAGCAGCGCC TCGGCTATGC CGATTTTGAG
CGCCGCACCG GCATGCCAGC GCTGCGCATT GACTCCAAAC AGGTCATATG GAAACGCGTG
ATGGATCATA ACGATCGCGC GCTGCGCATG GTGACGGTCG GCCGCAATGA ACCGGGAAAA
AATATTAATG GTTATGAGCG CGAAGATGGT TTCGATATCT CTGCCGCCTC CGAATTGATG
GCGATTCTGG CTCTCGCCTC GGATCTACGT GATTTGCGTC GCCGCATCGG TAATGTGGTG
TTGGCTTATG ATTTGGACGG TAATCCGGTA ACTACAGAAG ATCTGAAAGT AGCTGGCGCA
ATGGCAGTCA GCATGAAAGA AGCGATTGAG CCGACCTTGA TGCAAACTTT AGAAGGCGTC
CCAACACTGA TCCACGCCGG CCCATTTGCC AATATCGCGC ACGGTAACTC CTCGATCATT
GCCGATGAAA TTGCCACCCG TTTGGCCGAC TACACCGTGA CCGAAGGCGG TTTTGGCTCC
GATATGGGGT TTGAGAAAGC GTGCAACATC AAAGCCAAAG CATCCGGTAA AACACCAGAT
TGTGCGGTGA TTGTCGCCAC CTTACGCGGC TTAAAAGCCA ACTCAGGCCT GTATGATTTA
CGCCCCGGCC AAGCGGTACC GGATGCCCTA TTCGCGCCAG ACAGCGCCGC TTTGCAAGCC
GGTTTTGCAA ACTTGAAATG GCATATTGAT AACGTTAACC AGTATGGTGT GCCTGCCGTG
GTAGCGATTA ACCGCTTCCC ACAAGATTGT GCCGAAGAAC TGGAACAACT GGTTAAGCTG
ATAGAAGCCC TGCCCAACCG TGTATCGGTA GCCATTTCAG AAGGCTTTGC CAAAGGCGGT
GAAGGCACCC AACTCCTTGC CGAAAAAGTG GTTGAGCAGT GTCAACATCC AACGAAATTC
ACTCCGCTCT ACCATTCAGG CATACCATTG GATGAAAAAC TCAAAGCGGT CGCGGTAAAA
GGTTATGGCG CTGCCGAGAT TGCACTGAAT GATAAAGCCG CACAGCAATT AGCCACACTG
CAAGCCCAAG GCTTTGATCA TCTTGCGGTT TGCTTGGCGA AAACACCGCT GTCGATTTCT
ACCGATCCCG CAATCAAAGG CGCGCCACGT GATTTTATCG TACCGATCCG CGAGCTGCGT
TTATGTGCAG GCGCCGAATT TGTCTACGCC TTGTGTGGCA GTGTAATGAC CATGCCCGGC
TTACCGGAAA AACCTTCCTT TATGGCGCTC GATATCGATC AGCACGGCAA CATCGTCGGC
TTAAGTTAA
 
Protein sequence
MLPDIEICRA TPLAPIDTIA QKAGLHANEY ESHGQHKAKV SLHCLERLAN KPKGKFILVT 
AITPTPLGEG KTVTTIGLAQ GLAKLNHSVM ACIRQPSMGP IFGVKGGAAG GGYSQVAPME
ELNLHLTGDI HAVTAAHNLA AAAIDARIYH EQRLGYADFE RRTGMPALRI DSKQVIWKRV
MDHNDRALRM VTVGRNEPGK NINGYEREDG FDISAASELM AILALASDLR DLRRRIGNVV
LAYDLDGNPV TTEDLKVAGA MAVSMKEAIE PTLMQTLEGV PTLIHAGPFA NIAHGNSSII
ADEIATRLAD YTVTEGGFGS DMGFEKACNI KAKASGKTPD CAVIVATLRG LKANSGLYDL
RPGQAVPDAL FAPDSAALQA GFANLKWHID NVNQYGVPAV VAINRFPQDC AEELEQLVKL
IEALPNRVSV AISEGFAKGG EGTQLLAEKV VEQCQHPTKF TPLYHSGIPL DEKLKAVAVK
GYGAAEIALN DKAAQQLATL QAQGFDHLAV CLAKTPLSIS TDPAIKGAPR DFIVPIRELR
LCAGAEFVYA LCGSVMTMPG LPEKPSFMAL DIDQHGNIVG LS