| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0542 |
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| Symbol | |
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| ID | 5134481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 597110 |
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| End bp | 597814 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530864 |
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| Product | putative repressor protein PhnR |
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| Protein accession | YP_001215381 |
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| Protein GI | 147671988 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR03337] transcriptional regulator protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.706261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAATACG TAAAAATTAA AGATGCCATC GTAGAGCAGA TTGATGCCGG CATGCTGATG
CCGCGCCAAA AGCTCCCCGC TGAGCGCAAG TTAGCCGAAT CATTTGATAC CACGCGAGTC
ACCTTGCGTG AGGCGCTTTC CCTGCTCGAA GCTGAAGGAA AGATTTACCG TGAAGATCGC
CGCGGTTGGT TTATTTCGCC CGCGCCTTTA CGCTATGACC CCACTCAAAC GCTCAACTTT
ACTAATATGG CGTTGGCGCA AAATCGCCAG CCGAAAACGG AGTTGGTGTC TGCCAAAGCG
GTGATCGCCA ACAAGCAGGC GACTCGTCTT TTAAAACTCA AACCGTTTTC GGATGTGTAT
CGCGTAGACC GTGTGCGTTA TTTGGATAAC CGACCTGTGG TGTATGTCAC CAACTACATT
CGCCCAGAGC TGTTTCCAAA CCTGCTCGAT TTTGATCTGT CGCAGTCACT CACCGATCTC
TATCGTGAAC ACTATGCGAC ACAATACCAG ACGATTCACT ACCGTATATC CACCAGCTCG
TTACTGGGTG AAATGGCTCA AGCCCTGCGC GCAACGTCAG GTACACCGGC AATGGTGGTG
GAGCGGGTCA ACTATAACCA GAAAGGCGAG TTGATTGATT GTGATATTGA ATACTGGCGT
CACGATGCCA TTACCATTGA ATCCATCGCA GAATTAAAGC GTTAA
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| Protein sequence | MQYVKIKDAI VEQIDAGMLM PRQKLPAERK LAESFDTTRV TLREALSLLE AEGKIYREDR
RGWFISPAPL RYDPTQTLNF TNMALAQNRQ PKTELVSAKA VIANKQATRL LKLKPFSDVY
RVDRVRYLDN RPVVYVTNYI RPELFPNLLD FDLSQSLTDL YREHYATQYQ TIHYRISTSS
LLGEMAQALR ATSGTPAMVV ERVNYNQKGE LIDCDIEYWR HDAITIESIA ELKR
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