Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0528 |
Symbol | |
ID | 5134022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 583048 |
End bp | 583716 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530850 |
Product | putative glutathione S-transferase |
Protein accession | YP_001215367 |
Protein GI | 147671486 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATT TTTATACTGC AGCAACACCG AATGGTCACA AAATTGCCAT CGCATTGGAA GAGATGGGCT TGGAATACAC CACCCACGCG CTCAACCTTT CGAACAACGA CCAAAAACAG CCCGCATTTA CCGCGATTAA CCCAAATGGG CGTATTCCGG CGATTGTTGA CCGTGATAAT GAAGATTTTG CGGTGTTTGA GTCGGGTGCG ATTTTGCTCT ATCTCGCAGA GAAAACTGGA AAGTTCTTAC CCCAAGAAAG CAAAGCGCGC TCCAAAGTGA TCCAATGGTT AATGTTTCAA ATGAGTGGCG TGGGGCCGAT GATGGGGCAG GCCAACGTGT TTTATCGCTA TTTCCCAGAG AAAATCCAAC CAGCTATCGA TCGTTATCAA AAAGAGGGAC GCCGTCTGTT TGAAGTGATG GATGGCCAGC TAGCCCAAAA CCCGTATTTG GCCGGAGATG AATACACGAT TGCTGATATC GCGACCTTTC CATGGGTTCG AATCCATGAA TGGAGTGGGA TCTCGATTGA CGGTCTGACT CATTTACAGC GTTGGATGAA CGAGATCGCT GCGCGTCCTG CCGTAGTGAA AGGGTTAACC GTACCACCTC CGAGTAACGT CAGTGATGAT GAGCGAGCTA AACAGATCCG CAATATGGTA ACACGCTAA
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Protein sequence | MIDFYTAATP NGHKIAIALE EMGLEYTTHA LNLSNNDQKQ PAFTAINPNG RIPAIVDRDN EDFAVFESGA ILLYLAEKTG KFLPQESKAR SKVIQWLMFQ MSGVGPMMGQ ANVFYRYFPE KIQPAIDRYQ KEGRRLFEVM DGQLAQNPYL AGDEYTIADI ATFPWVRIHE WSGISIDGLT HLQRWMNEIA ARPAVVKGLT VPPPSNVSDD ERAKQIRNMV TR
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